Gene Cagg_1690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1690 
Symbol 
ID7268992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2063222 
End bp2064061 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content54% 
IMG OID643566532 
Productglycoside hydrolase family 16 
Protein accessionYP_002463027 
Protein GI219848594 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2273] Beta-glucanase/Beta-glucan synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACCAGA GGGTTTCTGT TATTATCGTT CGTCGGCTCC TTCAGCTTGG AGTGATCCTC 
TTGATACTGA CCGGCTGCAC GCCGACATCG GCAACACCGA ATCCGACCAG CACACCGGTG
CCAACCGTAT CACCGTGGAG GCTCGTGTGG AGTGATGAAT TTGACGGCGA GACACTCAAC
CCAAGCAATT GGCTGTTCGA TAAGGGGGCC GGCGGCTGGG GCAACAACGA ACTGCAATTC
TACACCAACC GCCCAGAAAA TGCACGGATT GAAGCAGGTG TGTTGGTGAT TGAAGCACGA
AAGGAAGAGT ATCTGGCGTG GGAATACACC TCGGCCCGGA TCAAGACGCA TTATCTGCAT
ACATGGACGT ATGGCCGGAT CGAGGCACGT ATGCAGTTAC CGGTAGGAGG TAAAGGGGTT
TGGCCTGCCT TCTGGATGCT GGGTGAGAAT ATCGCCACAG CACGCTGGCC CAACTGCGGC
GAAATTGACA TCATGGAAAA CATCGGTAAT CCGACGATGG TGTACGGTTC GGTCCATGGT
CCCGGTTATT CAGGTGGTAA CGCCATTACC AAACCCTTCG TTAGTTCCCA ACCACTGAGC
GACGATTTTC ACATCTACGC TGTGGAATGG GAACCGGATG CAATTCGCTG GTACGTTGAC
GATCAGCTCT ACCACACGTT ACGTCGCGAC CAGGTCCCCG GAGAATGGGT ATTCAATCAT
CCCTTTTTTC TCATTCTCAA CCTTGCCATC GGCGGCAACC GGCCTGGGTA CCCCGACGAA
ACAACCGTCT TCCCGCAGCA GTTGCGGGTC GATTATGTGC GCGTGTATCA GCAGACCTAA
 
Protein sequence
MYQRVSVIIV RRLLQLGVIL LILTGCTPTS ATPNPTSTPV PTVSPWRLVW SDEFDGETLN 
PSNWLFDKGA GGWGNNELQF YTNRPENARI EAGVLVIEAR KEEYLAWEYT SARIKTHYLH
TWTYGRIEAR MQLPVGGKGV WPAFWMLGEN IATARWPNCG EIDIMENIGN PTMVYGSVHG
PGYSGGNAIT KPFVSSQPLS DDFHIYAVEW EPDAIRWYVD DQLYHTLRRD QVPGEWVFNH
PFFLILNLAI GGNRPGYPDE TTVFPQQLRV DYVRVYQQT