Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1690 |
Symbol | |
ID | 7268992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 2063222 |
End bp | 2064061 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643566532 |
Product | glycoside hydrolase family 16 |
Protein accession | YP_002463027 |
Protein GI | 219848594 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTACCAGA GGGTTTCTGT TATTATCGTT CGTCGGCTCC TTCAGCTTGG AGTGATCCTC TTGATACTGA CCGGCTGCAC GCCGACATCG GCAACACCGA ATCCGACCAG CACACCGGTG CCAACCGTAT CACCGTGGAG GCTCGTGTGG AGTGATGAAT TTGACGGCGA GACACTCAAC CCAAGCAATT GGCTGTTCGA TAAGGGGGCC GGCGGCTGGG GCAACAACGA ACTGCAATTC TACACCAACC GCCCAGAAAA TGCACGGATT GAAGCAGGTG TGTTGGTGAT TGAAGCACGA AAGGAAGAGT ATCTGGCGTG GGAATACACC TCGGCCCGGA TCAAGACGCA TTATCTGCAT ACATGGACGT ATGGCCGGAT CGAGGCACGT ATGCAGTTAC CGGTAGGAGG TAAAGGGGTT TGGCCTGCCT TCTGGATGCT GGGTGAGAAT ATCGCCACAG CACGCTGGCC CAACTGCGGC GAAATTGACA TCATGGAAAA CATCGGTAAT CCGACGATGG TGTACGGTTC GGTCCATGGT CCCGGTTATT CAGGTGGTAA CGCCATTACC AAACCCTTCG TTAGTTCCCA ACCACTGAGC GACGATTTTC ACATCTACGC TGTGGAATGG GAACCGGATG CAATTCGCTG GTACGTTGAC GATCAGCTCT ACCACACGTT ACGTCGCGAC CAGGTCCCCG GAGAATGGGT ATTCAATCAT CCCTTTTTTC TCATTCTCAA CCTTGCCATC GGCGGCAACC GGCCTGGGTA CCCCGACGAA ACAACCGTCT TCCCGCAGCA GTTGCGGGTC GATTATGTGC GCGTGTATCA GCAGACCTAA
|
Protein sequence | MYQRVSVIIV RRLLQLGVIL LILTGCTPTS ATPNPTSTPV PTVSPWRLVW SDEFDGETLN PSNWLFDKGA GGWGNNELQF YTNRPENARI EAGVLVIEAR KEEYLAWEYT SARIKTHYLH TWTYGRIEAR MQLPVGGKGV WPAFWMLGEN IATARWPNCG EIDIMENIGN PTMVYGSVHG PGYSGGNAIT KPFVSSQPLS DDFHIYAVEW EPDAIRWYVD DQLYHTLRRD QVPGEWVFNH PFFLILNLAI GGNRPGYPDE TTVFPQQLRV DYVRVYQQT
|
| |