Gene Cagg_1684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1684 
Symbol 
ID7268986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2055014 
End bp2055745 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content56% 
IMG OID643566526 
ProductABC-2 type transporter 
Protein accessionYP_002463021 
Protein GI219848588 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1668] ABC-type Na+ efflux pump, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACTG ACATCTGGAC GGTCATGCGC AAAGAGCTGA AGGAAATCTC AAACATTCGC 
GAACGGATTG GGCTAATCAG TATACTCTTC CTGATCGCCT CTTTCGGCAT ACTATTGCCA
TGGCAGATGG GCAGATCGTG GATCGAGTCG CCGATCACGC TCATCTACTG GGCCTGGTTA
CCTCTCTTTC TGGTCATTAC CGTCGTGGCC GATTCATTTG CCGGCGAGCG CGAACGGCAT
ACGCTCGAAA CGTTGCTTGC GAGCCGGCTG CCCGATCAGG CCATTTTATT CGGCAAACTG
CTGGCCGCGC TGACGTATGG TGTCGGACTG ACGTGGATAA GTCTGCTGGT AGGGTTGATC
ACGATCAATC TTGGGCATAG CCCAGGAAGC TTGATCTTCT ATCCGCCGGA TGTGGCATTC
GCCGTGCTCA GCATCTCGCT CCTCAGCGGC GGCCTCGCTG CGGGTGCGGG AGTATTGGTG
TCGTTGCGGG TCAAGACGGT GCAGCAAGCC ACGCAACTGC TTAGTATTGC CGTGATGGTA
CTGATCTTCC TGCCTACGTT TGGGTTGCAG ATGCTGCCGG CAGCCTGGCA AGAACGGCTG
TTGAAGAGTG TCGCCAATTG GGATGTGACG CAAACGGTGT TGACGGTGAT TGTGATACTG
ATCATCATCG ACAGCATCCT GATCGGCGCG GCAATGCGTC GCTTCCAGCG GACACGGCTG
ATCTCCGAAT GA
 
Protein sequence
MLTDIWTVMR KELKEISNIR ERIGLISILF LIASFGILLP WQMGRSWIES PITLIYWAWL 
PLFLVITVVA DSFAGERERH TLETLLASRL PDQAILFGKL LAALTYGVGL TWISLLVGLI
TINLGHSPGS LIFYPPDVAF AVLSISLLSG GLAAGAGVLV SLRVKTVQQA TQLLSIAVMV
LIFLPTFGLQ MLPAAWQERL LKSVANWDVT QTVLTVIVIL IIIDSILIGA AMRRFQRTRL
ISE