Gene Cagg_1677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1677 
Symbol 
ID7268979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2047415 
End bp2048362 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content54% 
IMG OID643566519 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002463014 
Protein GI219848581 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCC TCATTACCGG CTCATCAGGC ATGATCGGCA CTAATCTCGG CCTACGCTTG 
ATCGAGGTCG GTCATCAGGT GTTTGGCATT GACAGGCGTG TGAACCCATG GACCGATCGC
ATCCCCACCC TGTTACAAGA TCTTTCCATA CCACAGCGTG ATTTTCGGTC CGGTATTGGC
GGCGCACCAT ACCCCCCATC CGATTTGGTT GTCCATCTCG CCGCCAACGC TAAAGTGCAT
GATTTGGTCA ACGAACCGTA CCGCGCCCTG GAAAATATCA ATATCACGTA TAACGTCCTC
GAATATTGTC GCACCCACGA TCTCCCGCTC ATCTTTGCCT CATCGCGTGA GGTTTACGGT
GATATTCACC GTTACATCAC CGAAGAGACG CGGGCCGATT TTAGCTTCAC CGAAAGCCCG
TATTCGGCCT CGAAGATTGC CGGTGAGGCG TTGATCTATG CGTATGCCCG TTGCTATGGG
TTGCGCTACA TCATTTTTCG CTTCTCAAAC GTCTACGGTC GCTATGACAA TGACCTATCG
CGCATGGAGC GGGTTATTCC ACTGTTTATT CACCGTATCA GACGGGGTGA ACCGGTAACC
GTCTATGGTG GCGATAAAGT GCTCGATTTT ACCTACATCG ACGATTGCAT TGATGGAATT
ATGCGGGGAA TCGTCCGTTT AATTCATGGT GAGGTGGTCA ACCGCACGAT TAATTTGGCC
TACGGTGAGG GGAATACGCT GATCCGGGCC GCCGAACTGA TCGGCGTTGC CCTGGGGCGT
CACCCTGATA TTATCGTCCA ACCGACCAAA CGGGTCGGCG AAGTGAGTCA TTACGTTGCC
GACATCCGGC GTGCGCGCGA GTTACTGGGG TATGAGCCGC AAGTACCTTT GGCCGAAGGT
ATCCGGCGCG CCGTTGCTTG GTCCACGGAG TACACACGGA ATGACTGA
 
Protein sequence
MRILITGSSG MIGTNLGLRL IEVGHQVFGI DRRVNPWTDR IPTLLQDLSI PQRDFRSGIG 
GAPYPPSDLV VHLAANAKVH DLVNEPYRAL ENINITYNVL EYCRTHDLPL IFASSREVYG
DIHRYITEET RADFSFTESP YSASKIAGEA LIYAYARCYG LRYIIFRFSN VYGRYDNDLS
RMERVIPLFI HRIRRGEPVT VYGGDKVLDF TYIDDCIDGI MRGIVRLIHG EVVNRTINLA
YGEGNTLIRA AELIGVALGR HPDIIVQPTK RVGEVSHYVA DIRRARELLG YEPQVPLAEG
IRRAVAWSTE YTRND