Gene Cagg_1653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1653 
Symbol 
ID7268955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2016441 
End bp2017151 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content52% 
IMG OID643566495 
Productsignal peptidase I 
Protein accessionYP_002462990 
Protein GI219848557 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC TACATTCACC ATCTGAACCA GCTCCCACAC TGCCAGAAAC CGAGACAGTG 
CGCCATCCAC GTGCCCCATT GCGGTACGTT GTGCGCGAGT TACTTGAAAC GGCGATTTTT
ATTCTGTTGG TATTTCTGAT AGTGCGTAGT GTGGTGCAAA ATTTCAAGAT CGAAGGCTCA
AGTATGGAGC CGACGCTTCA CACCGGTCAA TATATTTTGG TCAATAAATT GATCTATTTT
CACTTTGATC TCAATGCCCC GTTGCGGCTC CTCCCCGGTC AGTCCGATCT CCCGCCACGG
ATTGTCTATC CCTTCCGTCC ACCCCAACGT GGCGATATTG TTGTGTTTGA GTATCCCCGT
GATGTGCGCC GTGATTATAT CAAGCGGGTG ATCGGGCTAC CAGGTGATGT GATCGAGATT
CTTGAGGGCA AAGTCTACGT CAATGGCGTC TTGCTCGATG AACCATACTT ACGCGGCGCA
TTTACCTACT GCCTTGGTGG GTATCCGTGC GCTCAAGGGC CGGTGACGGT ACCTCCTAAC
TCGATCTTTG TGATGGGTGA TAATCGGGGG AATAGCTCCG ACTCACGTGA ATGGGATGCC
CTGCCTCTTG ATCGGGTTAT TGGACAGGCG TGGTTGATCT ACTACCCCTT TAGCGATTGG
GGGTTGGTGC CGCACCATCG TTACGATACA ACGACGGTTG CCACCCCTTG A
 
Protein sequence
MNDLHSPSEP APTLPETETV RHPRAPLRYV VRELLETAIF ILLVFLIVRS VVQNFKIEGS 
SMEPTLHTGQ YILVNKLIYF HFDLNAPLRL LPGQSDLPPR IVYPFRPPQR GDIVVFEYPR
DVRRDYIKRV IGLPGDVIEI LEGKVYVNGV LLDEPYLRGA FTYCLGGYPC AQGPVTVPPN
SIFVMGDNRG NSSDSREWDA LPLDRVIGQA WLIYYPFSDW GLVPHHRYDT TTVATP