Gene Cagg_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1645 
Symbol 
ID7268947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2005435 
End bp2006511 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content54% 
IMG OID643566487 
Productanti-sigma-factor antagonist 
Protein accessionYP_002462982 
Protein GI219848549 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTACAC TCCCCCGCGT TCCCTCACTC TTCCACCTAA TGCGTGAGAA GCTGGCGCCA 
GATGTAATTC CATTCATGGC AACCAAAGCC ACGTTGGTTG ATCTAAGTCA CACCCTCGAA
GATTGCATCT TACACAACCG GTTACCGAGT GTTATCTTTA CCGGCTTTCA AGAGAGCAGC
CACTGGCGCA AAGAGACACA ACGGTATCTA GAGTTAGCCA ACATCGCCAG CGCGGTTTGT
ATCTTTGCCG GTGGCCTGCC TGCCTTCCCC GACGAGCAAC ATATCGCCGT CACATTAGAA
GCCGGTGATC CGCTGCGGCA AGAGTGGTTT TTGTTGGTGC TTACCGAGTG GTTTTGTGCC
CTCTTGTGCG GACTAGACCA ACAACTACCG GCTGAGCGTG AAGCCGAGCG GCGCTTTGAA
ACCCTCCTCA CCTTCCAGCC TGAAGCAATT ACACAAGCGC TCGCTGTCCT GATACCGGTG
GTTGAGCGGT ATCGCCCGGA TCGAGCCGCC GAACTGGTGC AGGCCCACAC ACGCTTTCCT
CCGCGTCCAC CGAGCGGGCC GTATATCACC CAGATCGTCA GCGAAATTGT TTCCCATCTA
CAACGCCGCT ACGATCAAGA GCACCGGCTT GTGATGGAAA TCCAAGCCCT TTCGGCGCAA
CAGCAGGTAC TCGAAACCAT GATTGCCGAT CTCGGAGCGC CGGTAATTCC GCTCCTTGAA
GGGGTAATCC TTATGCCCAT TATCGGCAAT GTAGACTCGC GTCGTGCCCA ACTCATTATG
GAACACCTCT TAACCGGCAT TGCCGAACGG ATGAGCGATG TTGCAATCAT TGACATCACC
GGGATGCCGA TTGTTGACAC TGCCGTTGCT AATTACCTCT TACAAACTAT CCGGGCAACC
CGCTTACTCG GCGCACAAGT CATCATCACA GGTATTCGGC CCTCGGTCGC GCAGGCAATG
ATCAATCTCG GGATCGATTT TAGTCAAATC ATCACCCGTA GTACCCTGCG AGAAGGAATT
GAAGCAGCCC TTGGAGTATT GGGGTATGAA ATCCGCCGCA AAGGAACGGC GGACTAA
 
Protein sequence
MGTLPRVPSL FHLMREKLAP DVIPFMATKA TLVDLSHTLE DCILHNRLPS VIFTGFQESS 
HWRKETQRYL ELANIASAVC IFAGGLPAFP DEQHIAVTLE AGDPLRQEWF LLVLTEWFCA
LLCGLDQQLP AEREAERRFE TLLTFQPEAI TQALAVLIPV VERYRPDRAA ELVQAHTRFP
PRPPSGPYIT QIVSEIVSHL QRRYDQEHRL VMEIQALSAQ QQVLETMIAD LGAPVIPLLE
GVILMPIIGN VDSRRAQLIM EHLLTGIAER MSDVAIIDIT GMPIVDTAVA NYLLQTIRAT
RLLGAQVIIT GIRPSVAQAM INLGIDFSQI ITRSTLREGI EAALGVLGYE IRRKGTAD