Gene Cagg_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1642 
Symbol 
ID7268944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2000550 
End bp2002448 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content57% 
IMG OID643566484 
ProductABC transporter related 
Protein accessionYP_002462979 
Protein GI219848546 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTCC TGAACGCGAA CAACCTCAGT AAATATTACG GCGCTGAACT TATTTTTCAC 
GAGGTAAGCT TCCAGATTGC GCGCGGTGAA AAGGTTGCGA TTGTCGGGAT GAACGGAGCC
GGCAAAAGTA CCTTGTTACG GATCATTGCC GGGCACGAAA CACCCGATAG TGGCAGCTTG
AGCCTGGCCC GTGGCACGCG CGTGGCCTAT CTGGCCCAAG AAACCCGCTT TCTTAACGAA
GACACCCTCT GGCAAGCCAT GGAAGCCGCT TTAGCCGAGA TTCAACAGTG GCGGCGCGAA
TTGGCAGCGC TCGAAACGCG GTTGGCCGAT ACCAACGCAC CCGACTGGGA AGCGGTGATG
GAACGCTACG GCGAACTGAG TGCCCGTTTT GAACACGCCG GTGGTTATGA GATCGAGCAG
CGCATCGAGC GCGTGTTGTA CGGTCTCGGT TTCCAACCCG ATCAGTTTCA CCGCCAGATG
GGTCAGTTTT CCGGTGGACA AAAGACGCGG GCTGCGTTGG CAGCCGCTCT GCTCAGCGAC
CCTGACTTGT TGCTGCTCGA CGAACCGACC AACCATCTCG ATATGCAAGC ACTCGAATGG
TTGGAACAGT TTTTGCGCAC GTGGGATGGG ACGCTGATTG TAGTCTCGCA CGACCGCTAC
TTTCTTGAGC GTGTCACCAA ACGAACCCTC GAACTGAGCT TCAATCGTCT CGAAGATTAT
CCGGGAAGTT ATGAAAAGTA TCTGGCGCTG AAGGCCGAGC GCATGGAACG CCGGCTGAAA
GAGTATAAAG CGCAGCAGGA ATTCATTGCG CGTACCGAAG AATTCATCCG GCGGTATAAG
GCCGGTCAAC GGGCGCGCGA GGCCAAAGGG CGCGAAAAAC GGTTAGAACG GCTCAAGCGG
GAACAGATGA TCGAGCGACC GAAAGAGGCG GCCAAACTAC GGGTGGCGCT CGATAGTCAG
CTCCGCTCCG GTGAACTCGT CTTACGCCTT GACGGGGTGG TCGTTGGGTA CCAGGTACCC
CACGGCAGAA GCAACGCATT ATTGCAGGCC GATGATCTGA CGATCCGGCG CGGTGAACGG
GTTGGTTTGC TGGGGCCAAA CGGTGCCGGG AAGACGACCT TGCTGCGCAC GCTTATCGGC
CAACTACCAC CATTGCAAGG CATCGTTCGC TTTGGTCACG AGGTGCGCGT CAGTTACTAC
GCGCAAGGCC ATGATGTGTT GCAATGGGAC AACACGGTTC TCGCGGAAGT GTTGCGCGTC
GCACCGAGTC TTGGCGAGGG TGCAGCACGT AACCTGCTGG CCCGCTTTCT CTTTACCGGC
GATGATGTGT TTAAGCGAAT TGCCGATCTA AGTGGTGGTG AACGGTCACG AGTAGCGCTG
GCCCAACTGA CACTGCTACC CGGCAATATG CTGCTCCTCG ATGAACCGAC GAACCATCTT
GACATTGACG CCCGCGAAGC CTTGGAGGCG GTTTTGAAAG AGTATACGGG TACGATTCTA
TTCGTTTCCC ACGACCGATA CTTTATCGAC GCGCTGGCCG ATAAGCTCTG GATTATCGAG
CAGGGGCGTA TCCGCCAGTT TGTGGGCAAT TACAGCGATT ACATAGCCAG CCAGCAGGCC
GTAGAACCAG AACCGACCAC CAAGCCGGTT GCAGCCAAAG CGACACCGGC CAAACCACCA
CGTCCCGACC AGGCCGAACG AGCCAAGCAG CGCCGATTGG CCGCCTTAGA AGCGGAAGTC
ACCGCCCTTG AGCAAGACCT GGCCCGGCTG AGCAGTGAGC TTGATGCAGC CAGCCAAGCG
CGTGATATTG CCCGTCTGAC GGCACTTGGC GCACAATACG CCGAACTCGA ACGACTGTTG
GCCGACAAAT ACGCGCAATG GGAACAACTA GCGGCGTAA
 
Protein sequence
MTLLNANNLS KYYGAELIFH EVSFQIARGE KVAIVGMNGA GKSTLLRIIA GHETPDSGSL 
SLARGTRVAY LAQETRFLNE DTLWQAMEAA LAEIQQWRRE LAALETRLAD TNAPDWEAVM
ERYGELSARF EHAGGYEIEQ RIERVLYGLG FQPDQFHRQM GQFSGGQKTR AALAAALLSD
PDLLLLDEPT NHLDMQALEW LEQFLRTWDG TLIVVSHDRY FLERVTKRTL ELSFNRLEDY
PGSYEKYLAL KAERMERRLK EYKAQQEFIA RTEEFIRRYK AGQRAREAKG REKRLERLKR
EQMIERPKEA AKLRVALDSQ LRSGELVLRL DGVVVGYQVP HGRSNALLQA DDLTIRRGER
VGLLGPNGAG KTTLLRTLIG QLPPLQGIVR FGHEVRVSYY AQGHDVLQWD NTVLAEVLRV
APSLGEGAAR NLLARFLFTG DDVFKRIADL SGGERSRVAL AQLTLLPGNM LLLDEPTNHL
DIDAREALEA VLKEYTGTIL FVSHDRYFID ALADKLWIIE QGRIRQFVGN YSDYIASQQA
VEPEPTTKPV AAKATPAKPP RPDQAERAKQ RRLAALEAEV TALEQDLARL SSELDAASQA
RDIARLTALG AQYAELERLL ADKYAQWEQL AA