Gene Cagg_1629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1629 
Symbol 
ID7268930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1988476 
End bp1988997 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content56% 
IMG OID643566470 
ProductNADH dehydrogenase (ubiquinone) 30 kDa subunit 
Protein accessionYP_002462966 
Protein GI219848533 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.28745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.836874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGT TGACGCCTAC CGAACTGAAA GCCAAATTGG CTGCGGCACT GCCCGATGCG 
CTGCTCGAAC CCGAACCGAT CGCGATTTCG CCGCCGCCTA AGCATGGTCC TTTCGCCGCT
CTGTTTACGC CGCCTGATCC GTTGGTACGT CCTCAGCGGT TGGTTGATGC TGCGCTCTTC
GTGCGCGATA CGCTTGGCTA TGCTTACTTG TCCGACATCG CAGTTGTCGA TTACCTCTAC
GCCGGCTGTT TCGAGATCGT TTATCGCTTT TACCATCCGG CCGGCGGTTC GAGTATTGTA
TTGCGGGTGC GTGTACCACG CGATGAGCCG GTTGTACCGT CATTGACGCC GTATTGGCCG
GCGGCACATT TTCACGAACG CGAAGCCTAC GATCTGTTTG GAATAGTGTT TACCGGTCAT
CCCTATCTGC ACCGCATTTA TATGTGGGAC GAGTTCGAAG GCTTCCCGAT GCGCAAGGAT
TTTCCTCGCC AGGGTGATAA GTATCTCGGC GCTGAAGAGT AG
 
Protein sequence
MPELTPTELK AKLAAALPDA LLEPEPIAIS PPPKHGPFAA LFTPPDPLVR PQRLVDAALF 
VRDTLGYAYL SDIAVVDYLY AGCFEIVYRF YHPAGGSSIV LRVRVPRDEP VVPSLTPYWP
AAHFHEREAY DLFGIVFTGH PYLHRIYMWD EFEGFPMRKD FPRQGDKYLG AEE