| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1626 |
|---|
| Symbol | |
|---|
| ID | 7268927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 1984608 |
|---|
| End bp | 1985930 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643566467 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_002462963 |
|---|
| Protein GI | 219848530 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0675277 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGATA TACTTGCCGC CTTGATCAAC GGTACGTTTG GCTGGGGATG GCCAGAGTGG
GTATTGCGCC TGCTAAGCTA CATCTTGATC GTCACCATTG TATTGATCGT TGCGCCACTG
CAGATGCTCT TCTTTACCTA CTATGAGCGT CGCGTCATTG CGCGCATGCA GGATCGGATC
GGTCCTAACC GTGTTGGCCC CGAAGGCATC TGGCAGCCAA TCGCCGATGG CGTCAAGATG
TTTACCAAAG AAGACATCGT GCCCCAAGCC GCCGATCGGA TCGTGCATTT TCTCGCCCCG
TGTGTGGTTG TTGCCCCAAC TGTCCTAATG TTCGCAGTCG TGCCCTGGGG ACCGGGGATG
ACGCCGGTCG ATCTGCCAAC CGGTTTGCTC TTCTTCTTTG CTGTGTCGTC GATTAGCGCA
GTCGGACTGA TGATGGCCGG TTGGGCCAGT AATAACAAGT TCTCACTCCT TGGGGCTATG
CGGGCGGTGG CACAGATGGT ATCGTATGAA ATACCGGCGG TGCTATCGTT AATTGCCATC
GTCATTATTG TCGGCTCGCT CTCGCTAAAT GAGATCATTG CCTACCAGTC GGGATTATTG
ATCAGCAATC GTGATCTACC CGGCATCCCC GATCTTGGCC TCGGTTGGTT TGTCTTTACG
CCGGTTGGGT TCGTAGCCTT TATCGCATTC TTTATTGCCG CACTGGCTGA AGGTGAACGC
ACCCCCTTTG ATATTCCCGA AGCCGACTCA GAAATCGTTG CCGGCTATAT GACCGAATAT
AGTGGCATGA AGTTCGGCCT GTTCTACCTC GCTCAGTATG TGTTGAATTT CCTACTTTGT
GCGATTACGG CGATCATCTT CTTTGGAGGC TGGCAGGGAC CGGGAGTCAA CTGGTTGTAC
GCGCAAGCGA TAACGCCGGC AAACCCTAAT GGTAACGGTG TGTTTAACGT TTTAGCCGGT
GTGTTGGGCG TCTTTTACTT CCTGCTCAAG ACCTACGTCT TCTTCTTCGT TATGGTCTGG
TTGCGTGGTG CATTCCCGCG CTTGCGTATT GACCAGTTGA TGGATTTCGG CTGGAAGTTC
CTCATTCCCC TCACGCTGGC TAACCTCTTT TGTGCTGCGC TGTGGGTCGC ATTTATTCGC
TGGGGGCCGG CAGAAGGAAT GCTGATCACA GCCGGGTGGT CGCCGGTACT GCGCTGGCTG
GCAGCGTTTG TGGTCACGCT GGCGATCAAT CTTGGAGTCT ATCTGTGGTT GACACAGGTC
TATGCGGCGT CACAGGCCGA ACGGCGTCGG GCCGAGCTGG AAGAGCTGAG TGCGGCAGTG
TAA
|
|---|
| Protein sequence | MYDILAALIN GTFGWGWPEW VLRLLSYILI VTIVLIVAPL QMLFFTYYER RVIARMQDRI
GPNRVGPEGI WQPIADGVKM FTKEDIVPQA ADRIVHFLAP CVVVAPTVLM FAVVPWGPGM
TPVDLPTGLL FFFAVSSISA VGLMMAGWAS NNKFSLLGAM RAVAQMVSYE IPAVLSLIAI
VIIVGSLSLN EIIAYQSGLL ISNRDLPGIP DLGLGWFVFT PVGFVAFIAF FIAALAEGER
TPFDIPEADS EIVAGYMTEY SGMKFGLFYL AQYVLNFLLC AITAIIFFGG WQGPGVNWLY
AQAITPANPN GNGVFNVLAG VLGVFYFLLK TYVFFFVMVW LRGAFPRLRI DQLMDFGWKF
LIPLTLANLF CAALWVAFIR WGPAEGMLIT AGWSPVLRWL AAFVVTLAIN LGVYLWLTQV
YAASQAERRR AELEELSAAV
|
|---|
| |