Gene Cagg_1607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1607 
Symbol 
ID7268173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1962740 
End bp1963237 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content51% 
IMG OID643566448 
Productprotein of unknown function DUF520 
Protein accessionYP_002462944 
Protein GI219848511 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.752652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.103946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGGTG AAAATAGCTT TGATATTGTC TCGGATTTTG ATCAGCAAGA GTTGGTAAAT 
GCAGTTGATC AGACGTTGCG CGAGGTGCAG ACGCGCTACG ATCTCAAAGA TGCCGGTGTG
ACGCTGACCT TAAGCAAAAC AGAATTGATT ATCGAAGCCG ATAGCGAGAT GGCATTGCGC
AGTGTACGTG ATGTGCTCGA GACCAAAGCC CTACGCCGAA AACTCTCGCT CAAAATTTTC
GATTATGGTA AGCCGACCGA TGCCAGCGGT GGCCGTGTGC GGCAGGTGGT GACGTTGCGG
CGCGGCATTG ATAGTGAACT GGCGAAAAAG ATTGCCAAAA TGATCCGCGA TCGCTTCCCT
AAGGTTCAGC CGCGGATTCA GGGTGATGCG TTACGGGTGA CAGGCAAGAG TCGTGATGAG
TTGCAAGCGG TGATTGCCTT TTTGCGTGAA CGGGAGAGTG AAATTCCGGT GCCGTTGCAA
ATGACAAACT ATCGTTAG
 
Protein sequence
MPGENSFDIV SDFDQQELVN AVDQTLREVQ TRYDLKDAGV TLTLSKTELI IEADSEMALR 
SVRDVLETKA LRRKLSLKIF DYGKPTDASG GRVRQVVTLR RGIDSELAKK IAKMIRDRFP
KVQPRIQGDA LRVTGKSRDE LQAVIAFLRE RESEIPVPLQ MTNYR