Gene Cagg_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1602 
Symbol 
ID7268168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1957584 
End bp1958666 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content53% 
IMG OID643566443 
ProductNa+/Ca+ antiporter, CaCA family 
Protein accessionYP_002462939 
Protein GI219848506 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein
[TIGR00378] calcium/proton exchanger (cax) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTCA TCCTCTTCCT TGTTGGGGTC GTGTTGTTAG TGTTCGGGGC CGATCTGTTA 
GTCCGTGGTG CTGCAAGTTT GGCCGCCAGT ATGGGCGTCT CGTCGTTGAT TATCGGGTTG
ACGGTCGTGG CCGTTGGGAC GAGTTCGCCG GAGATTGCGG TGAGTTTGCA GGCTGCCTTC
CAAGGACAAG GTGCTATTAC GCTTGGAAAT ATCGTAGGGA GTAATATTGC TAATGTGATG
CTGATCTTGG GCGTGGCCGC AATGTTTGGC CCACTGCCGG TAGATCGACA GATCTTCCGA
CGTGATTTGC CGGTAATGAT CGGTGCGTCA CTGTTGACGT TGCTGCTTGC CTTTGACCGT
GAACTGTCAC GAGTCGATGG AGTTATTATG CTCTTGGGTC TACTAGGGTA CATTTGGGCG
ATCTGGCCGC GTGAAGAGAC CCAACAGACA TCGGTTTCGC ACCATCACCA TCAGCAACAT
TGGCGGGGCG TAGTGTTACA ACTGGCGATG GTGGTCGGTG GTCTTGCCCT ACTCGTTCTT
GGGGCGAATT GGCTGGTCGA TGGCGCAGTT GCCTTTGCGT CGTGGTTTGG CGTGAGCGAA
CTGATTATCG GGTTAACGAT AGTCGCTGTT GGCACATCGT TACCTGAAAT TGCCACTTCG
GTGATTGCCG GGTTGCGGGG TGAACGTGAT ATTGCAGTGG GGAATGTGAT CGGCAGTAAT
ATTCTTAATC TGTTACTCGT ACTGGCGCTG ACGATTGTTT TGTCGCCACA GCCGATTGCC
GTGCCCGTCG AGACGGTTCA GCTCGATCTG CCGGTGATGG TTGGGGCCGC CCTTGTGTGT
CTCCCTATCT TCTTTACCCG CCGCATGGTT TCGCAACGTG AAGGTAGCTT GCTGTTAGTA
TATTATCTCA GTTATACGCT CTACTTGATC CTCAGTGCTA GTCAGAATGA CGAATTGCCA
CTGTATAATA CGGTCGTCGG CTTAGTGCTG GTACCGCTGA CGGTTGTGTT GTTGGTGGTT
CGCGCATTGC GCTGGTTGGG TGAAGAGCGT CGATTGCGTC AAATGACCGA TGTAGCTGAG
TAG
 
Protein sequence
MTVILFLVGV VLLVFGADLL VRGAASLAAS MGVSSLIIGL TVVAVGTSSP EIAVSLQAAF 
QGQGAITLGN IVGSNIANVM LILGVAAMFG PLPVDRQIFR RDLPVMIGAS LLTLLLAFDR
ELSRVDGVIM LLGLLGYIWA IWPREETQQT SVSHHHHQQH WRGVVLQLAM VVGGLALLVL
GANWLVDGAV AFASWFGVSE LIIGLTIVAV GTSLPEIATS VIAGLRGERD IAVGNVIGSN
ILNLLLVLAL TIVLSPQPIA VPVETVQLDL PVMVGAALVC LPIFFTRRMV SQREGSLLLV
YYLSYTLYLI LSASQNDELP LYNTVVGLVL VPLTVVLLVV RALRWLGEER RLRQMTDVAE