| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1589 |
|---|
| Symbol | |
|---|
| ID | 7268155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 1940090 |
|---|
| End bp | 1940905 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643566431 |
|---|
| Product | DNA photolyase FAD-binding |
|---|
| Protein accession | YP_002462927 |
|---|
| Protein GI | 219848494 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTCC GTACCGATCT GACGACACGC ACCGAACAAG CAGCCTATCT CGCCGATGCG
CTTGCCGGCT TGTACCAGGG ACCGGCCACC CCGTCACCGA TCCGTGGTGG GCGGTGGGCC
GCGTTGCGGC GGTTACGTGC CTTTGATGTG CGCAACTATG CGCGGACCCG TAACGATGTA
GCGCGGCGTA CTGTCTCACA GCTCTCGCCA TACCTTCGTC ACGGCGTTCT CACCCTTGCC
GAAGTACGCG ATTCGATCCT GAACCGATTC GGTCATACAC CCGATACTGA AAAGTTTGTC
AACGAATTAG CCTGGCGTGC ATTTTGGCAA ATCGTCTATG CCCATCTTGG TGAGCGGATT
CATCACGATC TTGAGCCGGC AAAGCATCGC TCCCGCGTGG CGCGTCGTTC GCTTCCGCCC
GAAGTGCTCA CCGCGACGAC CGGTCTTGTG TGTATTGATG AGTCGTTGCA GGAGTTGTAC
ACAACCGGCT ATATGCACAA CCACGCACGC ATGTGGGTTG CCGCTTACCT GCAACACTGG
CTCGGTGTGG ATTGGCGAGA GGGGGCGGAT CTTTTTTACC GTCATCTGCT CGACGGTGAT
CCGGCTTCGA ATAGTCTGTC GTGGCAATGG GTGGGTAGTA CCTTCAGCCA CAAGCCGTAC
ATCTTTAATC GCCAAAACGT TGAACGGTTT AGTGGTGGTA CGTTCTGTAA CCGCTGCCCA
CTTGCTAACG GTGGTTGTCC GTTTGATGAG AGCTATGAAC AACTCGCCCG TCGTCTGTTT
GGAGTAACCT TAGCCGAACT GGAGGGGCGA CGATGA
|
|---|
| Protein sequence | MQLRTDLTTR TEQAAYLADA LAGLYQGPAT PSPIRGGRWA ALRRLRAFDV RNYARTRNDV
ARRTVSQLSP YLRHGVLTLA EVRDSILNRF GHTPDTEKFV NELAWRAFWQ IVYAHLGERI
HHDLEPAKHR SRVARRSLPP EVLTATTGLV CIDESLQELY TTGYMHNHAR MWVAAYLQHW
LGVDWREGAD LFYRHLLDGD PASNSLSWQW VGSTFSHKPY IFNRQNVERF SGGTFCNRCP
LANGGCPFDE SYEQLARRLF GVTLAELEGR R
|
|---|
| |