Gene Cagg_1581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1581 
Symbol 
ID7268147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1934602 
End bp1935723 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content59% 
IMG OID643566423 
ProductCys/Met metabolism pyridoxal-phosphate-dependent protein 
Protein accessionYP_002462919 
Protein GI219848486 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.316874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCAGC ATCCCTCCGG CCTGAAACTC GCATCGTGGC TGGTGGCCGC CGGACGTACC 
GTCGATCCCG GTGCATCGCT AAACGTACCA CCGATCCCGG CCTCCAACTT TATTCTTGGG
CAGGGACGTT CGTATGCACG CGGTGACTCC ACACCGACGT GGGAAGCACT GGAAGAGGTG
ATCGGTGGGC TAGAAGCCGG CAAAGCGGTA GCCTTCGCTT CCGGTATGGC GGCAGTCGCT
GCCATTTTCG ATCAACTTCC GTCTGGCGCA CGAGTAGTCT TGCCCGACGA CTGCTACCAG
GGCGTTGTCG GTTTGGCTAT GGCCGGCGCC GCTCGCGGAC GCTGGTCGGT GCAACGCATT
GCCCTGACCG ATACCGCCGC CTGGCAACAA GCTTGTACCG AAGCCGATCT GATCTGGCTT
GAGTCACCGT CTAATCCGCT GCTAACCGTC GCCGATCTCG ACGTGATTTG TGCTGCACCG
CGCAAACCCG GCACGATTGT GGCAGTTGAT AATACCTTCG CTACTCCACT AAACCAGCAA
CCACTCGAAC TAGGAGCAAC GGTATCCGTC CAATCGGCAA CGAAGTTTAT CGGCGGCCAT
TCCGATTTAT TGGCGGGGGT CGTCACTACT CGCGACGAAG CACTTTGGCA GCAACTCCAC
CAAACCCGTA CCCTCGCCGG TGCTATTCCC GGCACACTCG AAGCATTTCT GGCCGTGCGT
GGCGCGCGTA CCCTCGCGTT GCGGCTCGAA CGGGCTCAAT ACAACGCTAT GATCCTCGCC
CAACGGCTGC TCGAACATCC TCTGGTCACG TGTGTCCGTT ATCCGGGATT GCCATCCCAT
CCGACGCACA CTACCGCCAA GCGGCTGTTA AAAGGATTTG GGACGATCAT TTCGTTTGAT
GTCGCCGGTG GAGCGGCTAC CGCCGATGCC GTTTGTCGGC ATGTGCGACT GATCCGCCAC
GCAACCAGCT TAGGGGCAGT TGAGTCGACG ATGGAACGGC GCGCAGCAGT TGCCGGTCAA
GAGCATTTAC CACCATCACT ACTACGACTC AGTGTGGGGA TCGAAGACGT TCATGATCTG
TGGAACGATC TCGATGCGGC TATTCGCGCT ACAATTACAT GA
 
Protein sequence
MEQHPSGLKL ASWLVAAGRT VDPGASLNVP PIPASNFILG QGRSYARGDS TPTWEALEEV 
IGGLEAGKAV AFASGMAAVA AIFDQLPSGA RVVLPDDCYQ GVVGLAMAGA ARGRWSVQRI
ALTDTAAWQQ ACTEADLIWL ESPSNPLLTV ADLDVICAAP RKPGTIVAVD NTFATPLNQQ
PLELGATVSV QSATKFIGGH SDLLAGVVTT RDEALWQQLH QTRTLAGAIP GTLEAFLAVR
GARTLALRLE RAQYNAMILA QRLLEHPLVT CVRYPGLPSH PTHTTAKRLL KGFGTIISFD
VAGGAATADA VCRHVRLIRH ATSLGAVEST MERRAAVAGQ EHLPPSLLRL SVGIEDVHDL
WNDLDAAIRA TIT