| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1577 |
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| Symbol | sdhA |
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| ID | 7268143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | + |
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| Start bp | 1929688 |
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| End bp | 1931661 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643566419 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_002462915 |
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| Protein GI | 219848482 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0114016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA CGAAGAATGA GACGACGGTT CGCACCGGTA CCCGGCAGGT CGAGTTTGTG
AGTGTCCTCG ACTCGAAAGT ACCGAGCGGT CCTATTGAGC AACGCTGGGA TAAGCACCGC
TTCGAAATGA AGTTGGTCAA CCCGGCCAAT CGCCGTAAGT ATACGATTAT TGTGGTCGGT
TCCGGGCTGG CCGGAGCGTC AGCCGCAGCT ACCCTTGGCG AGGCGGGCTA CAACGTGCTC
TGCTTCTGCT ATCAGGATAG TCCGCGCCGC GCACATAGCA TCGCTGCACA GGGTGGGATT
AACGCCGCGA AAAATTATCG CAACGACGGT GACAGCATCT ACCGCCTCTT CTACGATACG
ATTAAGGGTG GCGACTTCCG TGCTCGCGAG AGTAACGTCT ATCGGCTGGC TCAAGTTTCG
GTGAATATTA TCGACCAGTG CGTTGCCCAA GGTGTGCCGT TCGCCCGTGA ATATGGCGGT
CTGCTCGATA ACCGCTCGTT CGGTGGTGCC CAGGTGGCCC GTACTTTCTA TGCTCGTGGT
CAAACGGGGC AGCAATTGTT GCTCGGAGCG TACCAGGCGC TGAGCCGTCA GATCGCAGCC
GGTACGGTGA AGATGTTCCC TCGCACCGAG ATGCTCGATC TGGTGGTCGT CGATGGCCGG
GCACGCGGTA TCATTACCCG TGATCTCGTG ACCGGCAAGA TTACGCGCCA TGTTGCCGAT
GCAGTGGTAC TGGCGACCGG TGGTTATGGG AATGTCTTCT ACCTCAGCAC TAATGCCAAA
GGCTGTAATG CAACGGCCAT TTGGCGGGCC CACCGTCGCG GTGCTTTCTT CGGTAACCCA
TGCTTTACCC AGATTCACCC GACCTGTATT CCTATCAGCG GCGAATATCA GAGTAAATTG
ACACTCATGT CGGAGTCGCT GCGGAACGAT GGCCGGATTT GGGTACCGAA GAAGAAAGGT
GATACTCGCC GACCACAGGA TATTCCCGAG TCCGAGCGCG ATTACTACCT CGAGGAGCGC
TACCCTAGCT TCGGTAATCT GGTGCCACGC GATATTGCCT CACGGGCCGC CAAGCAAGTC
TGTGACGAAG GCCGCGGTGT TGGTCCCGGT GGTCTCGGTG TGTACCTCGA CTTTTCTGAT
GCAATTAAGC GGCTTGGTCG CCAGAAGATT GCCGAACGCT ACGGGAATCT GTTTGACATG
TACAAGCAGA TTACCGGTGA AGACCCCTAC GAAACGCCTA TGCGCATCTA TCCCGCCGTA
CACTATACGA TGGGCGGGTT GTGGGTCGAT TACAATTTGC AGAGCACGAT TCCCGGCCTC
TTTGTGATCG GTGAGGCAAA CTTCTCCGAT CACGGCGCCA ATCGACTCGG TGCGTCGGCG
TTGATGCAGG GTTTGGCCGA CGGCTACTTC ATCCTGCCCT ATACCATCGC CAACTTCCTT
GCTCAAGTCA AACCCGGTGG GATAAGCATC GACCGGCCTG AGTTCGCCGC AGTGGAAGCT
GAAGTCCAAC AGCGGATTAA TCGGCTACTC AGCATTCGCG GTAAGCGCAC CGTCGATTCC
TTCCACCGCG AATTGGGTAA GCTCATGTGG GATAAATGCG GCATGGCACG CAACGCCCAA
GGCTTGCGCG AGGCGTTGGC CCGCATCCCC GAGATCCGTG CCGAGTTCTG GGAGAACGTG
AATGTACCCG GTGAGGCCGG TGATCTGAAT CAGGCTCTTG AGAAGGCTGG CCGTGTCGCC
GATTTTCTCG AATTGGCCGA GCTGATGTGT ATCGATGCCC TCCATCGCGA GGAGTCGTGT
GGTGGTCACT TCCGCGAAGA GTATCAAACC CCTGATGGCG AAGCGCTGCG CAACGATGAG
CAGTTCTCGT ATGTAGCAGC GTGGGAGTTT ACCGGCGATA CCGCCAAGCC CCGTCTGCAC
AAGGAACCGC TTGTGTTTGA ATACGTCAAG CCGACTCAGC GCAGCTATAA GTAG
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| Protein sequence | MSETKNETTV RTGTRQVEFV SVLDSKVPSG PIEQRWDKHR FEMKLVNPAN RRKYTIIVVG
SGLAGASAAA TLGEAGYNVL CFCYQDSPRR AHSIAAQGGI NAAKNYRNDG DSIYRLFYDT
IKGGDFRARE SNVYRLAQVS VNIIDQCVAQ GVPFAREYGG LLDNRSFGGA QVARTFYARG
QTGQQLLLGA YQALSRQIAA GTVKMFPRTE MLDLVVVDGR ARGIITRDLV TGKITRHVAD
AVVLATGGYG NVFYLSTNAK GCNATAIWRA HRRGAFFGNP CFTQIHPTCI PISGEYQSKL
TLMSESLRND GRIWVPKKKG DTRRPQDIPE SERDYYLEER YPSFGNLVPR DIASRAAKQV
CDEGRGVGPG GLGVYLDFSD AIKRLGRQKI AERYGNLFDM YKQITGEDPY ETPMRIYPAV
HYTMGGLWVD YNLQSTIPGL FVIGEANFSD HGANRLGASA LMQGLADGYF ILPYTIANFL
AQVKPGGISI DRPEFAAVEA EVQQRINRLL SIRGKRTVDS FHRELGKLMW DKCGMARNAQ
GLREALARIP EIRAEFWENV NVPGEAGDLN QALEKAGRVA DFLELAELMC IDALHREESC
GGHFREEYQT PDGEALRNDE QFSYVAAWEF TGDTAKPRLH KEPLVFEYVK PTQRSYK
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