Gene Cagg_1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1573 
Symbol 
ID7268139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1924835 
End bp1926082 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content56% 
IMG OID643566415 
Producthypothetical protein 
Protein accessionYP_002462911 
Protein GI219848478 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.864803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGCCT TCTCTCGCCG CAACCGGAAT CGACGCTTAG GCCAACCGCT CTTTTCAATT 
GAAGAGACGG AGTCTGTTCA GCGTCCCCCA AGGCAACCGC TTGCTGAAGT GACGTCGGAT
CTCGATGCCT TGCTCGAACA GCGTGTTCAG CCGTCTCGTC CTGAAGAGCC GATCGGGTTG
CGTGTGCCCG AGGACGTGAG ATCGGCGTAC CGACGGGCGC AGCGGAGCCG GACGGATGCT
CATCACCGCC CATATCAAAC TGCCAAACAC GCCCGGCTCA TAGCGCCGGA ACAGTCTGTC
ACCGATCACA CTACGCTCTC GGCAGCGCCG AGTGGCAACA CAGTGCGGCC AATTCCGTCG
GCAAGGCATG CTGTTGGTGC TTATGCGAGG AGCAATGGTT CATCGCCAAC CGCACGGTTG
GTGGCCGTTT CAGAACGAAC GCCGGTAACA TTAGCCCGAG ACACTGTTGC TGTAGGTGTT
GATCGGAGAC TACCTAACCA CCGATTAGCC GATGCGACAT CTGTGGGTTT CACACCTCTG
CCCGAAGCAA CCGATCTGCT CCTGCCGGTA AGGCAGCGTT CTGCTCCATG GGTGTGGGCT
GCTCAAGCCA ATCAGTGGCC GGTGATGGTA GGGATTGGCT TGGTAAGCCT CGTGATTATT
GTTGTTTGGT TAGTGACCTT ATCGCGTTCG CCTATCTTGA GCTTTCAGTA CGCGGCGGAT
ATTAGCCAAG CGGTACCGAT GAATGCTGTC AGTCTCGCCA ATATCCCGGC ACCAGGTGAT
TACCGACTGC GTTCGGCGCC AAGTCTGACT CCGGCGCAGA TCGATGAAAT TCTGCGCAGC
TATGGCTCGC CGGCAACCGG TACCGGTGAG ATCTGGTACC GCCTTGGGTT GGAGTACAAC
ATCGATCCAG CCTATGCGAT AGCTTTCTTC ATTCATGAGA GTGGTGCCGG GACGAACCCG
AATTGGGCCG GTATGAAGCC CGATGGCAGT ACAACGCACA ATGTCGGTAA CATCATTTGT
GCCGGTTATC CGACGTGCTA TGGCCGGTTT CGTGATTACC CCGACTGGGA GACCGGGATT
GCCGATTGGT ATCGGCTTAT CGATGTCGAG TATCTTCGTT GGCGTGGTTT GCAAACCGTG
GCTGACATTA TTCCGATTTA TGCACCGTCG TTTGAAAATG ACGTGCAGGG CTACATACAG
GTTGTGACCG GTCTGGTCGA TCGGTGGCGG AGTGGTCAAA TTCCCTAG
 
Protein sequence
MSAFSRRNRN RRLGQPLFSI EETESVQRPP RQPLAEVTSD LDALLEQRVQ PSRPEEPIGL 
RVPEDVRSAY RRAQRSRTDA HHRPYQTAKH ARLIAPEQSV TDHTTLSAAP SGNTVRPIPS
ARHAVGAYAR SNGSSPTARL VAVSERTPVT LARDTVAVGV DRRLPNHRLA DATSVGFTPL
PEATDLLLPV RQRSAPWVWA AQANQWPVMV GIGLVSLVII VVWLVTLSRS PILSFQYAAD
ISQAVPMNAV SLANIPAPGD YRLRSAPSLT PAQIDEILRS YGSPATGTGE IWYRLGLEYN
IDPAYAIAFF IHESGAGTNP NWAGMKPDGS TTHNVGNIIC AGYPTCYGRF RDYPDWETGI
ADWYRLIDVE YLRWRGLQTV ADIIPIYAPS FENDVQGYIQ VVTGLVDRWR SGQIP