Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1572 |
Symbol | |
ID | 7268138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 1923926 |
End bp | 1924570 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643566414 |
Product | Peptidase M23 |
Protein accession | YP_002462910 |
Protein GI | 219848477 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.399873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACCAA GTATTGCGAT TATTATCACG CTTCTATTTA TCGTCTTCAG CGCTCTACCG CGCTTGTTCA ACCCTGACCA ACCCGTGCTG AGCAATTGGC GTGGTTCGGT TGATCAGGCA CTGAAGGTCA ATAGTATCAA TAACGCAGCG CAGGAAGCGT TAGTCGGCGT GGTACAGCCG CAGGGTCGTG GCTTTGATGC TGCCATGATT CCGAGTGGCA ATCCATTACG GGTAGCTAAT ACTGTCATGA CGCAGGGCTA TGGTGTGGGT ACGCATGCCC CGGCACAGGT TTGGGGCGCT GTCGATCTCG CGCTCGATGG AGATGGCGAT GGTAAAGCCG ATCCCGCCGG GACGCAGAAC CAACCGGTGT ATGCAACGCA CGCCGGGCGC GTCACCTTAA CCTACGATAG CTGGCCGGCA GGAAATCATA TCTGGGTGAC GAACGAACTC TACCGTACCG GTTACTCGCA TCTTAGTGGG TTTGCGGTGA GTGATGGTCA GTGGGTCAAT CCCGGCGATC TGATCGGCTA TATCGGCTCG ACCGGTATGT CAAGTGGGCC ACATTTGGAT TATCAGGTTT GGGTTTGGCG TGATGGCCGG TGGATAAATC AAAATCCTCT TGATTATGGT GTGTTTGCGC GGTGA
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Protein sequence | MRPSIAIIIT LLFIVFSALP RLFNPDQPVL SNWRGSVDQA LKVNSINNAA QEALVGVVQP QGRGFDAAMI PSGNPLRVAN TVMTQGYGVG THAPAQVWGA VDLALDGDGD GKADPAGTQN QPVYATHAGR VTLTYDSWPA GNHIWVTNEL YRTGYSHLSG FAVSDGQWVN PGDLIGYIGS TGMSSGPHLD YQVWVWRDGR WINQNPLDYG VFAR
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