Gene Cagg_1572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1572 
Symbol 
ID7268138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1923926 
End bp1924570 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content54% 
IMG OID643566414 
ProductPeptidase M23 
Protein accessionYP_002462910 
Protein GI219848477 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.399873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACCAA GTATTGCGAT TATTATCACG CTTCTATTTA TCGTCTTCAG CGCTCTACCG 
CGCTTGTTCA ACCCTGACCA ACCCGTGCTG AGCAATTGGC GTGGTTCGGT TGATCAGGCA
CTGAAGGTCA ATAGTATCAA TAACGCAGCG CAGGAAGCGT TAGTCGGCGT GGTACAGCCG
CAGGGTCGTG GCTTTGATGC TGCCATGATT CCGAGTGGCA ATCCATTACG GGTAGCTAAT
ACTGTCATGA CGCAGGGCTA TGGTGTGGGT ACGCATGCCC CGGCACAGGT TTGGGGCGCT
GTCGATCTCG CGCTCGATGG AGATGGCGAT GGTAAAGCCG ATCCCGCCGG GACGCAGAAC
CAACCGGTGT ATGCAACGCA CGCCGGGCGC GTCACCTTAA CCTACGATAG CTGGCCGGCA
GGAAATCATA TCTGGGTGAC GAACGAACTC TACCGTACCG GTTACTCGCA TCTTAGTGGG
TTTGCGGTGA GTGATGGTCA GTGGGTCAAT CCCGGCGATC TGATCGGCTA TATCGGCTCG
ACCGGTATGT CAAGTGGGCC ACATTTGGAT TATCAGGTTT GGGTTTGGCG TGATGGCCGG
TGGATAAATC AAAATCCTCT TGATTATGGT GTGTTTGCGC GGTGA
 
Protein sequence
MRPSIAIIIT LLFIVFSALP RLFNPDQPVL SNWRGSVDQA LKVNSINNAA QEALVGVVQP 
QGRGFDAAMI PSGNPLRVAN TVMTQGYGVG THAPAQVWGA VDLALDGDGD GKADPAGTQN
QPVYATHAGR VTLTYDSWPA GNHIWVTNEL YRTGYSHLSG FAVSDGQWVN PGDLIGYIGS
TGMSSGPHLD YQVWVWRDGR WINQNPLDYG VFAR