Gene Cagg_1565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1565 
Symbol 
ID7268130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1914700 
End bp1915248 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content55% 
IMG OID643566407 
ProductYceI family protein 
Protein accessionYP_002462903 
Protein GI219848470 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATGGA CAATTGACGC TTCACACTCG ACGATTACCT TCTCGGTTCG CCACATGATG 
ATTTCAAAGG TGCGTGGCCG CTTTAGCCGG TTTGAAGGCA CCGTCAATTT TGATGAACAG
AATCCGGCCA ACTCGTCGGT GCAGGTAACC ATTGATGCCA CAAGCATCGA CACGCGCGAC
GAGCGACGCG ACGGTCATCT GATGTCACCG GATTTTCTCG ACGTTGCCAA CTACCCATCG
ATCACCTTTG CCGGCAAGCG CATTGAACTG ATCGATGAGA CGCATGGTCG CATCATCGGT
GATCTGACGA TCCGTGGCGT CACACGCGAA GTCGTCCTCG ATGTCGAATA CAACGGCCAG
TCGAAGTCAC CGTGGGGCAC GACGAGCGCC GGCTTCAGTG CCAGCACCAA GATCAATCGG
AAAGATTGGG GGTTGACGTG GAACGTTGCC CTTGAAACCG GCGGAGTATT GGTCGGCGAA
GAGGTATCAA TCGAGATTGA GCTGGAGATC GTGAAGCAGG TACCGCAAGA AGTGCCGGTC
ACCGCCTAA
 
Protein sequence
MTWTIDASHS TITFSVRHMM ISKVRGRFSR FEGTVNFDEQ NPANSSVQVT IDATSIDTRD 
ERRDGHLMSP DFLDVANYPS ITFAGKRIEL IDETHGRIIG DLTIRGVTRE VVLDVEYNGQ
SKSPWGTTSA GFSASTKINR KDWGLTWNVA LETGGVLVGE EVSIEIELEI VKQVPQEVPV
TA