Gene Cagg_1552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1552 
Symbol 
ID7267329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1899091 
End bp1899990 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content59% 
IMG OID643566394 
Productglycosyl transferase family 2 
Protein accessionYP_002462890 
Protein GI219848457 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACGTG AGGTGCGACT CAGTATCATT ATCCCATGTT ACAACGCTGC GGTAACCCTG 
GGTGAACAGC TCGCTGCGTT GGCCGATCAG ACGTGGGATC GGCCATGGGA AGTGATTGTG
GCCGACAACG GTTCGCGCGA TGATTCGCGC CGAGTTGCTG CTGCCTTTCT CAACCGGTTG
CCGCACCTAC GCATTATTGA TGCAAGCGCA CGGCGTGGTG GTGCCTTTGC CCGGAACGAA
GGCGCCCGCC ACGCGCGTGG TACTGCCTTG GCCTTCGTTG ATGCTGATGA TATGGTGGCG
CCGGGTTGGG TGGCGGCAAT CGGCAATGCT CTCGACCGCC ACCCGTTTGT CGCCTCGCGC
TTTGATATCG AGCGGCTCAA TCGCCATTCC TGGCTGAGCC GGACGCGGCG TAATCCGCAG
GCCGACGGGT TACAGCGGGT GAATTATCCG CCGTATTTGC CGCATGCCGG TGGGTGTGGC
TTAGCCGTCG AGCGCTCGCT GCACGAACTG GTTGGTGGTT TTGATGAGAC GCTGTTCCGT
TTGATGGATA CCGATTATTG TTTCCGGATT CAGTTGCAGG GTAATGTTCC ATTGACCTTC
GTTCCTGAGG CGCTCGTCTA CGTTCGGTAC CGCGACACCT TACGCGGGAT GTTGCGCCAA
ACGCGCGAGC GGGCGATTGC CAATGTGGCG TTAGCTCGTC GCTATGGCGG TGAACAACTC
GCGCAATGGT GGTCGTTCCA ACCCTGGTTG GCGTATGCCA GGCGCTGGTT CCGCCATTTG
GGCCGGGCGA TACGGATCCG TCAGCGCGAA CAGTTGGCGG AATGGTTGCG GGTGAATGCA
TGGTTGATCG GATTGTTGCA AGGCAGTCTG CAATACCGTT ACCCACCCCT AGCAATCTAG
 
Protein sequence
MQREVRLSII IPCYNAAVTL GEQLAALADQ TWDRPWEVIV ADNGSRDDSR RVAAAFLNRL 
PHLRIIDASA RRGGAFARNE GARHARGTAL AFVDADDMVA PGWVAAIGNA LDRHPFVASR
FDIERLNRHS WLSRTRRNPQ ADGLQRVNYP PYLPHAGGCG LAVERSLHEL VGGFDETLFR
LMDTDYCFRI QLQGNVPLTF VPEALVYVRY RDTLRGMLRQ TRERAIANVA LARRYGGEQL
AQWWSFQPWL AYARRWFRHL GRAIRIRQRE QLAEWLRVNA WLIGLLQGSL QYRYPPLAI