Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1551 |
Symbol | |
ID | 7267328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 1898348 |
End bp | 1899079 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643566393 |
Product | polysaccharide deacetylase |
Protein accession | YP_002462889 |
Protein GI | 219848456 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTCAT CGCAGCAAGG TGGTCGTGCT CGTTCCTCAC TTCTTGGGCG TTGGTTGGCG CCGTTGGGCC GACGGTGGCT TGGTACACTT ATCCGGGTAG AGACGACTAC TCCCCTGGTT GCATTGACCT TTGATGATGG GCCACATCCC CGTTACACAC CACAGATTCT CGACGTGTTG GCTCACTATC ACGCGCGTGC TACCTTCTTT GTGTTGGGTC GGCACGCGGC TGAGCAGCGT GATCTGGTAG CGCAGATTGC TGCTGCCGGT CACGTGATTG GTAACCACAC CTTTCATCAC GTGCGTATGC CACAGACGCC GCGCTACCGA CGTTGGCAAG AATTGTGGTC TGCACAGCGG GCGGTTGCAC CGTATGGAAC CCGCCTCTTT CGTCCGCCTT ACGGTGGACA ATCGTATGGA TCGCGCGTCG ATGCGCTGTT GCTCGGGTAT GAAGTTGTCG GTTGGACGTT CCACATTGAA GATTGGGTTG CGCAATCGCC GGTTCAGTTG CTTGAACGGT TAAACCGACA ACTTCGTCCG GGCAGCATTA TCCTGCTCCA CGACCGGCTG GTGCAGCCGC GTGATCCGGC GGCAGCCGAT CGGACACCGT TGATCGAGAC GCTGGCAACG TTCCTCGCTC AATGGGAAGA GACGTATCGT TTTGTGACTG TCCCTGAACT CATCCGTGCC GGACGCCCCG TGCGTGGGCC ATGGTTCCGT CCGGCTTTGT AA
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Protein sequence | MVSSQQGGRA RSSLLGRWLA PLGRRWLGTL IRVETTTPLV ALTFDDGPHP RYTPQILDVL AHYHARATFF VLGRHAAEQR DLVAQIAAAG HVIGNHTFHH VRMPQTPRYR RWQELWSAQR AVAPYGTRLF RPPYGGQSYG SRVDALLLGY EVVGWTFHIE DWVAQSPVQL LERLNRQLRP GSIILLHDRL VQPRDPAAAD RTPLIETLAT FLAQWEETYR FVTVPELIRA GRPVRGPWFR PAL
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