Gene Cagg_1551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1551 
Symbol 
ID7267328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1898348 
End bp1899079 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content58% 
IMG OID643566393 
Productpolysaccharide deacetylase 
Protein accessionYP_002462889 
Protein GI219848456 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTCAT CGCAGCAAGG TGGTCGTGCT CGTTCCTCAC TTCTTGGGCG TTGGTTGGCG 
CCGTTGGGCC GACGGTGGCT TGGTACACTT ATCCGGGTAG AGACGACTAC TCCCCTGGTT
GCATTGACCT TTGATGATGG GCCACATCCC CGTTACACAC CACAGATTCT CGACGTGTTG
GCTCACTATC ACGCGCGTGC TACCTTCTTT GTGTTGGGTC GGCACGCGGC TGAGCAGCGT
GATCTGGTAG CGCAGATTGC TGCTGCCGGT CACGTGATTG GTAACCACAC CTTTCATCAC
GTGCGTATGC CACAGACGCC GCGCTACCGA CGTTGGCAAG AATTGTGGTC TGCACAGCGG
GCGGTTGCAC CGTATGGAAC CCGCCTCTTT CGTCCGCCTT ACGGTGGACA ATCGTATGGA
TCGCGCGTCG ATGCGCTGTT GCTCGGGTAT GAAGTTGTCG GTTGGACGTT CCACATTGAA
GATTGGGTTG CGCAATCGCC GGTTCAGTTG CTTGAACGGT TAAACCGACA ACTTCGTCCG
GGCAGCATTA TCCTGCTCCA CGACCGGCTG GTGCAGCCGC GTGATCCGGC GGCAGCCGAT
CGGACACCGT TGATCGAGAC GCTGGCAACG TTCCTCGCTC AATGGGAAGA GACGTATCGT
TTTGTGACTG TCCCTGAACT CATCCGTGCC GGACGCCCCG TGCGTGGGCC ATGGTTCCGT
CCGGCTTTGT AA
 
Protein sequence
MVSSQQGGRA RSSLLGRWLA PLGRRWLGTL IRVETTTPLV ALTFDDGPHP RYTPQILDVL 
AHYHARATFF VLGRHAAEQR DLVAQIAAAG HVIGNHTFHH VRMPQTPRYR RWQELWSAQR
AVAPYGTRLF RPPYGGQSYG SRVDALLLGY EVVGWTFHIE DWVAQSPVQL LERLNRQLRP
GSIILLHDRL VQPRDPAAAD RTPLIETLAT FLAQWEETYR FVTVPELIRA GRPVRGPWFR
PAL