Gene Cagg_1541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1541 
Symbol 
ID7267318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1886607 
End bp1887521 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content60% 
IMG OID643566383 
Productglycosyl transferase family 2 
Protein accessionYP_002462879 
Protein GI219848446 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.297515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACTG TAACCTCGAC GATACCGACA ATTACCGATT TGCCGCCACC ACCACCTGAC 
CGACAGGGTT GGCCGTGGAC AATCGCAACG CCACCGGCGC CAGCCTTGTT GGACGATGGC
CGCCCGTGGC CCCGGATTAC CATTGTGACG CCCTCGTACC GGCAAGCCCA GTACCTCGAA
GAGGCGATCC GGTCGGTGTT GTTGCAGGGC TACCCAAACC TTGAATACAT CGTGATGGAT
GGCGGGAGTC GTGACGGGAG TGTCGCGATC ATTCAACGCT ACGCACCGTG GTTGAGCTAC
TGGCAATCGC AGCGCGATGG TGGGCAGTCG GCGGCACTTG CCGATGGGTT TGCCCGCGCT
ACCGGCGAGA TTCTCGCGTG GATCAATTCC GATGACCGTT TGCAGCCGGG AGCGTTGCAG
CGAGTAGGAC GTTTTTTTGC TAAACGTCCG TGGCTGGCTT TCGCCAGCGG CGATGTCAAT
TTCATCGATA CCGATGGGCG GGTGACGGCA CGGATCTTTG CCTTGCCACC TAACGGGAAG
CTCACTGCGC AACTCGGTGT GCATCGTTGG CCACAGCAGG GATGTTTTTG GCGACGTAGC
GTGTATGAGC GCGTGGGGGG GGTTGACCGT AGTCTACGCT TCTGTATGGA TCGCGATCTC
TTCATCCGGC TGAGCACTGC CGGGCCGAGC CGCCGCATAC CGGGGCCGCC TCTGGGCGAT
TTTCGCCTCC ACGAGGAAGC GAAGACCGCT ACTCTTCAGG CGGTTTGGCA GCGCGAGCAT
GCGCTATTGC AACGACGTTA TGGTCGAACA CTCGTTCCAC ACGATTATGC CGGCTTACGC
ATCCTTTGGT GGCTTTGGCA GAAACACGCG AGCCTGCGAC AGCGGCTGTA TCGGCATTTT
GGCTTTGAGT GCTAG
 
Protein sequence
MPTVTSTIPT ITDLPPPPPD RQGWPWTIAT PPAPALLDDG RPWPRITIVT PSYRQAQYLE 
EAIRSVLLQG YPNLEYIVMD GGSRDGSVAI IQRYAPWLSY WQSQRDGGQS AALADGFARA
TGEILAWINS DDRLQPGALQ RVGRFFAKRP WLAFASGDVN FIDTDGRVTA RIFALPPNGK
LTAQLGVHRW PQQGCFWRRS VYERVGGVDR SLRFCMDRDL FIRLSTAGPS RRIPGPPLGD
FRLHEEAKTA TLQAVWQREH ALLQRRYGRT LVPHDYAGLR ILWWLWQKHA SLRQRLYRHF
GFEC