Gene Cagg_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1540 
Symbol 
ID7267317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1885237 
End bp1886592 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content56% 
IMG OID643566382 
Producthypothetical protein 
Protein accessionYP_002462878 
Protein GI219848445 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTAA CCGGTGCCAT CATTCTCAAT CCGCTTGAGC TTGCGTTACT CGGCCTCGTA 
TGTTTGTACG CGGTCTGGCG CGGACGACCG GAGATTCCGT TGGCGATCTA TCTTTCGTTT
TCGCTGTGGA CGCGCACGAT CTTTGTGGGA CCGAGTGCGG CAACGTGGCC GTTGTTGGCA
ACGATTGTGG TGGCACTGAT TCGCTATTTG CACGTCGTGC GGCCATGGTC GCTGCGACCG
CAACAACTTG ATGCAACGAC TCGCCAGATC TTTCCTGCTA CCGATGGCTG GATTGTGCCG
TGGATGATAT TCTGGTGGGC GTGGGTATTG TTGATCCTGT TCCAGTTTCG CTTGCCGGAT
AAGATGTCGA TTGTGCGCCC AGTTGTCTTG TACATTATCG TGGGCGCGTT CGTGGCCTTG
ATCGCGATCC GTGATGCGGC GGCGGCCCGA CGGTTTGCTA TTGCGTACCT ACTGACGAGC
GCTTACGGTT TGTACGCAGC GTTACGCTTT ATCGGTGTCC CGCTCTCTTA TCTGCTCAGC
GATCCCGGTT TATCGTCGCT GCCGTACCGC AATCTTGGGA TCCGCGAGTA TAACTTCTTT
TCACATCATC TGAGCATCGC TTTTATTCTC GGTCTGGCCC TCTTCTTACA AGCGCGGCGG
TTCTGGTCGC TTACGGCGGT ATTGGCACTA GCACTGTGGT GTATCTACGG TGTCTTTCTG
ACCGGTGCTC GCCAATCGTT GAGTGGCTCA GGCATCGCCG CAGCGCTCAT CTTTGGCTGG
TCGCTGACTC GTACCGGCAA CAAGTCTTGG CGAGTGCCGT TGGCTATCGC GATCATCATC
ATCGTCGTCG TCAGTATTTA TCAGGTGGCA CCGCATTTAG TTGTGCGGGA AGGAGAGAGT
GGTCTTGACG AATCGTTCAA CATCTTCGCG GATCGCGGTG GATTGTGGCA GATCGGTCTG
AACTACTTCT TCGCATCACC GGTGTGGGGT TGGGGATTTG AATACAAGCT CTGGTCGCAC
AATATTTTTA TCGGTACGCT GGCCGATCAA GGGTTGGTTG GGATGACGTT CCTCATCGGC
TATCTGATCT GGGCGTTGCG ACGTTTGCCG GCGATTTGGG CACAGACCCC CACCGATGAT
CGCGGAGTCT GGCGCATAAC CTTCTTTGCC ATCTTTGTCT TTGCCGTGGT GCATGGTCAA
GCGTCGGGCA ATACGATGGT GACAGCCCAT CTCCATTGGC CGTTGTGGGC GGTGTGGGCG
TTGAGTGCGG GTGTCGTTAC GGCACCGGCG CATGCACCGT TGCCGCTGCC GGTGCGGGTA
CGACCACGCA CACTATCGGC GGGGGTGCGA GCATGA
 
Protein sequence
MIVTGAIILN PLELALLGLV CLYAVWRGRP EIPLAIYLSF SLWTRTIFVG PSAATWPLLA 
TIVVALIRYL HVVRPWSLRP QQLDATTRQI FPATDGWIVP WMIFWWAWVL LILFQFRLPD
KMSIVRPVVL YIIVGAFVAL IAIRDAAAAR RFAIAYLLTS AYGLYAALRF IGVPLSYLLS
DPGLSSLPYR NLGIREYNFF SHHLSIAFIL GLALFLQARR FWSLTAVLAL ALWCIYGVFL
TGARQSLSGS GIAAALIFGW SLTRTGNKSW RVPLAIAIII IVVVSIYQVA PHLVVREGES
GLDESFNIFA DRGGLWQIGL NYFFASPVWG WGFEYKLWSH NIFIGTLADQ GLVGMTFLIG
YLIWALRRLP AIWAQTPTDD RGVWRITFFA IFVFAVVHGQ ASGNTMVTAH LHWPLWAVWA
LSAGVVTAPA HAPLPLPVRV RPRTLSAGVR A