Gene Cagg_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1536 
Symbol 
ID7267313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1881219 
End bp1882070 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content60% 
IMG OID643566378 
ProductYdjC family protein 
Protein accessionYP_002462874 
Protein GI219848441 
COG category[S] Function unknown 
COG ID[COG3394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.700585 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCATC TCATTATTAC CGCCGATGAT TACGGGATGT GTCCAGAAGT GAATCGGGCC 
ATCGAGGAGT GTCTGGCTGC CGGCGCATTA CGAGCGACGT GTGTGATGGC GAACATGCCG
TATGATACCG ATGCCGCACA ACTCCGCCGT GCCTTTCCCC AAGCCTCAAT CGGCATTCAC
TGGACCCTCA CGCTGGGGAA GCCGGTCGCA GCCCCTAAAC AGGTACCCGA TCTGCTGGCA
CCAAACGGTC AATTTTGGCC GGCAGCGGAA TTCCGGCGCC GCTGGCTCGC CCGCCGTATT
GCACCGGAGC AGGTGCGCCA CGAACTGCAC GCTCAGTATG CGCGGTTCGT CGCCGTTGCC
GGCCAACCCG ATTTTTGGAA TACGCACCAG AATATACATG TGTTACCCGG TCTCTTTATG
GTGGTCGTTA CCCTTGCACA TGAACTGGGT ATCCCGGCTA TGCGCTCGCA CCGTCGGATT
ACCGTCCCAC GTCATGGATC GGCTCTGACC TACCATCTCT CCCATCCGGT GTATTGGCTG
AAGGGCCAAA TCATTGCCCG CTGGGCTGCG GCAGCCGCTC GATATGGGCT GCGTATGCCT
GCCGGCGTCG TGAGCACACC GGGATTTGGG CCGGGGAAGG CAGCGGTTGA ACAGATCGTG
CACCAAATGA CGTGGCCGCG CCACGCGCCT GCCGAGTTGG TCATCCACCC GGCCACCCGG
CTGATCCCCG AACTTTTTGG GTCGTTGACC GATTCACGTC TGCGCGAGTA TGAAGTCTTT
CGCGATCCGA TACTCGTCAA CCGCTTAGCT GCTGCCGGTG TCCAGACAAC CGGCTTTGAG
GTGTTGCGAT GA
 
Protein sequence
MHHLIITADD YGMCPEVNRA IEECLAAGAL RATCVMANMP YDTDAAQLRR AFPQASIGIH 
WTLTLGKPVA APKQVPDLLA PNGQFWPAAE FRRRWLARRI APEQVRHELH AQYARFVAVA
GQPDFWNTHQ NIHVLPGLFM VVVTLAHELG IPAMRSHRRI TVPRHGSALT YHLSHPVYWL
KGQIIARWAA AAARYGLRMP AGVVSTPGFG PGKAAVEQIV HQMTWPRHAP AELVIHPATR
LIPELFGSLT DSRLREYEVF RDPILVNRLA AAGVQTTGFE VLR