Gene Cagg_1531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1531 
Symbol 
ID7267308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1872404 
End bp1873852 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content57% 
IMG OID643566374 
ProductFAD linked oxidase domain protein 
Protein accessionYP_002462870 
Protein GI219848437 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID[TIGR00387] glycolate oxidase, subunit GlcD 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGG CTGAACTAAT TGCAGAACTT GAGCGCATCC TCGGTCCGCG CGGTGTGGTG 
ACCAACCCCG ATGCCCTGCT TACGTATGAT GCCGACGGGT GCGTGATGGA TACCCACGAG
CCGCACGTCG TCACTCTCCC GACCAGCGCC GAGCAAGTGG CGGCGATTGT CCGGCTGGCT
GCCCGTGCCG GTATGCCGAT TGTACCGCGT GGCGCCGGTA CTGGGTTGGC CGGTGGGGCG
ACGCCGATGC AGGGGGGGAT TGTCATCTCC ACGGCCCGCA TGGATAAGAT TTTACAGGTT
GATACGGCCA ATGGGCGCGT GCTCTGCCAG CCCGGAGTTA TTAATTGGGA ATTGTCACAA
TATCTCAAGC CGTTTGGCTA TCAGTTCGCC CCCGATCCCT CTTCCCAAAA AGCATGCACA
ATTGGTGGGA ATATCGCTAA CAATTCCGGC GGTCCGCACT GTCTGAAGTA TGGTATAACT
GCCAGCCACG TGCTCGCCGT GCAAGTTGTC TTACCCGATG GCTCGATTGT GTGGACGGGG
GATGGTAGTG GCCATACACC CGGCTACGAT TTAACCGGCG TGATCACCGG TTCGGAAGGA
ACCATCGGCT TTGTCACCGC AGCATGGCTG CGCTTGACTC GTCTGCCGGA AGCGGTGCGG
GTGGTGTTGG CCCTCTTCCC CGATATTGCC GGCGCCTCCA ATACCGTCTC ACAGGTGATC
GCCAGTGGTT TGCTGCCTGC TGCACTGGAG ATTATGGATC GACTGGCGAT TAAGGCGGTC
AACGATATGT ATAAGTTGGG TTTGCCTGAA GCTGCCGGCG CTGCCTTGCT CATCGAGGTC
GATGGGGTTG AAGACGGTCT TGATGAGCTG CTGCACGATA TTACCGCCAT CTGCTGGCGC
AATGGGGCGA TAGATGTACG ACCTGCGCGC ACATTGGCTG AACAAAATCA GGTGTGGGCC
GCGCGTAAAA ATGCTTTCGG GGCGATGGGT CGTCTCGCGC CAACTTATTA TCTGGTCGAT
ACCGTTGTGC CGCGTACAAA GCTACCGCAA ACGATGGATG AAGTGGGCCG GATTTCGCGC
GAGTTCCGCT TACCGATTGC TAATGTCTTT CACGCCGGCG ATGGTAACCT GCATCCGATT
ATCCTCTTCG ACCGTCGCGA TCGTTCGCAG AACCAGCGCG CGCTCGAGGC GGCGACCAGT
GTTATGAAAG TGAGTATCGA TTTCGGTGGC GTGATAAGTG GTGAACATGG GATCGGGGTC
GAGAAGCAAG ATTATATGAC GTTGCTCTTT ACAACCGAGG ATTTGGCGGC GATGGCCGGT
CTTCACCAGA GTTTCGATCC TCACGATCTG TTTAATCCCG GTAAGGTCTT CCCGAAAGGT
CGTGGTTGTG GTGAATTGGC CGCTCTCCGG CGTGCGGGGA TTGCCTGGAG TACGTTGAAA
ACGAGTTAA
 
Protein sequence
MNRAELIAEL ERILGPRGVV TNPDALLTYD ADGCVMDTHE PHVVTLPTSA EQVAAIVRLA 
ARAGMPIVPR GAGTGLAGGA TPMQGGIVIS TARMDKILQV DTANGRVLCQ PGVINWELSQ
YLKPFGYQFA PDPSSQKACT IGGNIANNSG GPHCLKYGIT ASHVLAVQVV LPDGSIVWTG
DGSGHTPGYD LTGVITGSEG TIGFVTAAWL RLTRLPEAVR VVLALFPDIA GASNTVSQVI
ASGLLPAALE IMDRLAIKAV NDMYKLGLPE AAGAALLIEV DGVEDGLDEL LHDITAICWR
NGAIDVRPAR TLAEQNQVWA ARKNAFGAMG RLAPTYYLVD TVVPRTKLPQ TMDEVGRISR
EFRLPIANVF HAGDGNLHPI ILFDRRDRSQ NQRALEAATS VMKVSIDFGG VISGEHGIGV
EKQDYMTLLF TTEDLAAMAG LHQSFDPHDL FNPGKVFPKG RGCGELAALR RAGIAWSTLK
TS