Gene Cagg_1528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1528 
Symbol 
ID7267305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1867032 
End bp1868429 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content58% 
IMG OID643566371 
Productprotein of unknown function DUF224 cysteine-rich region domain protein 
Protein accessionYP_002462867 
Protein GI219848434 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.389896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTGA CTCAGTCATC ACCAGCGTCA GCGCCGCCGG TCATTCCCCT GATCGGCTTT 
AGCGTCAAAG ATAAGCCAAG CTCTGATATT ATTAATACCT GTGTTCACTG CGGGTTGTGC
CTCTCGTCGT GTCCGACCTA CCGCGAGACG GGTTTGGAAA TGGCGTCGCC GCGTGGACGC
ATCTACCTGA TGAAAGCGGT TGACGAAGGG CGGATTAGCC TCGCCAGCCC AGTCTTTCAA
GAGCAGATGA GCCTCTGTCT CAATTGTCGA GCTTGTGAGG CGGTGTGCCC ATCAGGGGTG
CAGTACGGTG CGATCCTTGA AGCGAGCCGT GCGCAGATCG AGCAGGCCCG TGCCGGTAAA
GCCGGGCCGG CAGCGACGCC GGGTGCGCCG GAGCCAAAGT TACCACCGCG ACCACTCTGG
CAGCGCGCGT TGCGTGGTGC TGTGTTTGGA GTGTTGTTCA AGCGGATGGA AGTCTTTCGT
CTCTTCTCAA CGATGATGCG CCTGTACCAG CGGAGTGGCG TACAGTGGGT GGCCCGCAAG
AGTGGCATCC TCAAACTATT GCGGTTGGCC GATACAGAAG CGATGTTACC ACCGATCAGC
GATCACTATA TCGTGCCGAA CGGGCAAATC TTGCCCGCCG AGGGTGAACG GCGATACAGT
GTTGCGCTGC TCACCGGCTG CATCATGAGT ACGGCATTTG CTCACGTCCA CGAAGCGACG
ATTCGCGTCC TGCGCAAGAA TGGTTGTGAG GTGATCATCC CGCCCGACCA AGGCTGTTGC
GGGGCGCTGC ATACGCACGG TGGCGATCTT GATGGTGGAC GTGAGTTGGC ACGGCGTAAT
ATTGCCGCAT TTGAGGGTTT GGGGGTAGAT GCGATCATCG TAAATGCCGC CGGTTGTGGC
AGTACGATGA AAGAGTACGG CCATCTGTTG CACGATGATC CGGAGTGGCG TGAGCGCGCC
GAACGCTTTA GTGCCAAAGT CAAAGATGTG CATGAATTCC TCACCGGGAT TGACTTCAAC
CGCGCGGCCC TCGGTCGTCT CGATGTCACC GTCACCTATC AGGAACCGTG TCACCTTGTG
CATGCCCAAC GGATTAGCGC GCAACCCCGC ACACTGCTGA CCGCCATCCC TGGCCTGAAG
ATAAAAGAGA TGCCCGAGTC GTCGTTGTGT TGTGGCAGCG CCGGTATTTA TAACGTCACC
CAGCCTGACA TGGCGATGAG TCTTGGCGCC CGTAAAATTG ATAATGCCCT TACCACCGGC
GCCGAAATTA TCGCGACGGC CAATCCTGGC TGCGCGTTGC AGTTGGTCGG TGAGCTGCGC
CGGCGCGGTA AAGCGGTCCA AGTGCGCTAT ATTATCGAAT TGCTCGATGA GTCGTATCGA
AGATCGGTAG TTGCCTGA
 
Protein sequence
MTVTQSSPAS APPVIPLIGF SVKDKPSSDI INTCVHCGLC LSSCPTYRET GLEMASPRGR 
IYLMKAVDEG RISLASPVFQ EQMSLCLNCR ACEAVCPSGV QYGAILEASR AQIEQARAGK
AGPAATPGAP EPKLPPRPLW QRALRGAVFG VLFKRMEVFR LFSTMMRLYQ RSGVQWVARK
SGILKLLRLA DTEAMLPPIS DHYIVPNGQI LPAEGERRYS VALLTGCIMS TAFAHVHEAT
IRVLRKNGCE VIIPPDQGCC GALHTHGGDL DGGRELARRN IAAFEGLGVD AIIVNAAGCG
STMKEYGHLL HDDPEWRERA ERFSAKVKDV HEFLTGIDFN RAALGRLDVT VTYQEPCHLV
HAQRISAQPR TLLTAIPGLK IKEMPESSLC CGSAGIYNVT QPDMAMSLGA RKIDNALTTG
AEIIATANPG CALQLVGELR RRGKAVQVRY IIELLDESYR RSVVA