Gene Cagg_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1517 
Symbol 
ID7267294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1855263 
End bp1856378 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content60% 
IMG OID643566361 
Producttransposase, IS605 OrfB family 
Protein accessionYP_002462857 
Protein GI219848424 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID[TIGR01766] transposase, IS605 OrfB family, central region 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGT TTGTCTCCAA GTTACGTCCG ACACTTGCTC AAGTGGCTTG TCTTTCTGAG 
ACGGTCGAAA CCTGCCGCCA ACGCTACAAC CACGCTCTGA GCGAGCGCAA GACTGCCTAT
CGGGAGCGTG GCGAGTCCAT CGGCTTTGCA CGCCAATGCG CCAGCCTGCC TATGCTGAAA
CGGGAGGTGC CATATTTGCA GCGTGTCCAC TCTCAAGTGG TGCAGGATGT CGTGCGTCGA
GGAGACCGCG CGTTTCAAGC GTTCGTTCGG CGGGTGAACG CCGGTGAAAA GGCGGGGTAT
CCGCGCTGCA AAGGGTGGGG CCGGTACGAT AGCTTCACCT ATCCCCGGTG GGGCAACGGC
GTCAAGCGGG AGCAGGGACG GTTTGTTCTC TCCAAAATCG GCGCTCTCCG GCTGCACAAC
GATCGCCCGG TTGAGGGCAC GCCAACAATC TGTATCATCG TTCGCAACGC GGATGGATGG
TACGCACATA TCGTGTGTGA CGTTGCACCG TCGCCGCTCC CGCCAACCGG CAGGTCGTTT
GCAACGCTGT CGAACGGCGT GCAGATTGCC AACCCGCGCT CCTATCGCGT CGCCGAACGC
ACGCTGAAAC AGGCACAACG ACGGCTTTCT CGTCGCGTGA AGGGTAGCAA TCGCTCCCGT
AAGGCACGCA CGTTGCTTGC GAACGCTCAC CTGAAGGTCA AGCGGGCGCG ACGGGACTTT
GCTCACACAA TCGCCCGCGC ACCGGTCAAT GAGGATGACC ATATTGTGGT TGAGAAACTG
AACATTCGGG GGATGGTACG GAACCATCCC CTTGCCAAAT CGATCTCCGA CGCCGGATGG
GGTATCGTTC TGAATATCCT GCTCGCCAAG GCTGCACGTG CTGGGCGAGT CGTGGTGGCA
GTCAACCCTG CCGGAACGTC GCAAAGATGC GCGCGCTGTG GCGAGTCCGT TCCCAAACGG
CTTGCCGTTC GCTGGCACTC CTGCCCGTAT TGTGGTTGTG AATTGCACCG CGATCATAAT
GCTGCGCTTA CTATCCTAAA GAAGGGCGGG GGCACCGCCT TCGGGGAGGC TTTGCCGTTG
GGCGGGCCGA AGAACCGAGA ACCCCACAGG CTTTAG
 
Protein sequence
MKTFVSKLRP TLAQVACLSE TVETCRQRYN HALSERKTAY RERGESIGFA RQCASLPMLK 
REVPYLQRVH SQVVQDVVRR GDRAFQAFVR RVNAGEKAGY PRCKGWGRYD SFTYPRWGNG
VKREQGRFVL SKIGALRLHN DRPVEGTPTI CIIVRNADGW YAHIVCDVAP SPLPPTGRSF
ATLSNGVQIA NPRSYRVAER TLKQAQRRLS RRVKGSNRSR KARTLLANAH LKVKRARRDF
AHTIARAPVN EDDHIVVEKL NIRGMVRNHP LAKSISDAGW GIVLNILLAK AARAGRVVVA
VNPAGTSQRC ARCGESVPKR LAVRWHSCPY CGCELHRDHN AALTILKKGG GTAFGEALPL
GGPKNREPHR L