Gene Cagg_1490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1490 
Symbol 
ID7267267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1828163 
End bp1830664 
Gene Length2502 bp 
Protein Length833 aa 
Translation table11 
GC content62% 
IMG OID643566334 
Producthypothetical protein 
Protein accessionYP_002462830 
Protein GI219848397 
COG category 
COG ID 
TIGRFAM ID[TIGR02243] conserved hypothetical protein, phage tail-like region 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATCC AATTCCGCTG TGCAAATCCA CGCCGGGCGC AAGTGCTGAG CACGTCTGCC 
ATCCCACTCA ACGGGATCGA TCTGCTCGAA GTGCTCGATC GCGACGCGCC TGCCGGTGTG
TCGCCGCAAC AGACGCTGCT GGTGCAGATG ATCAAGCCGG CGCCGTGGGG TCTCGGCGCG
GCCAATGTGC AGCTAACCGG CGGTGTGCGT GTCACCGGCG TGAAGGTACG CTGGGTCTTG
CGCGCCGCTG ATGCCAGCTC CGCCGATGTT GCCGCCGGAC GCATCACCGG TGCCGAGCGA
ACGTTTTACA ATGGGTTGTC CGCCGCCGAT CGCACTTTGG TGGTGCGTGT CGATCAGGCT
GGCGACTTTT CGACCTACAC GCTGCGCCTT GTCCGTTCGC CTACCGATCC GAGTCCGCCT
GCCGGCTTTG ATCCCATCTT GAGCAGGATT ACGTTCTCGT TCAAAGTTGA CTGCCCAAGC
GAGTTCGATT GCGCTCCGGT GAGTGATTGC CCACTAGAGG ACGACGGTAC ACCACCGATT
GACTATCTGG CTCGCGATTA CGCCAGTTTG CGCCAATTGC TCTTTGACCG GTTAGCTGCC
GTCTCACCCA CCTGGCGCGA GCGTAATCCG GCCGATCTTG GCGTGGCAAT TGTCGAGGGG
TTGGCCTACA TCGGCGATTA TCTCAGCTAC TATCAAGACG CGGTCGCCAC CGAAGCCTAT
CTCGGCACGG CGCGCCGCCG GGTGTCGTTG CGCCGCCACG CGCGTCTGCT TGATTACGTG
CCCCACGACG GCGCGAATGC GCGGGTGTGG GTGCAGGTTC AGGTTGATGC GCCATGTACC
CTGCCGGCCC GTACCCCCGT GCTGACCAAA GTCGGCGGCG CGCCGCCGCG CTTGCTGCCC
GCTTCCGCCG AACTGGCCCT CGCTCGCCAG CAACAGCCGC TAGTCTTCGA GACAATGCAC
GATATACGCC TTGATCCAGC GTTGAACCAG ATCGATTTCT ATACTTGGGG GGATGAAGGC
TGCTGTCTGC CTGTCGGTAC TACGCGCGCC ACGCTGCGCG GTGATCTCAG CTCTCGCTTG
CATTCCGGCG ATGTGCTAGC CTTTATCGAG CAGCGCAGTC CGATCACCGG CTACCGCGCC
GATGCCGATC CTGCTCGCCG TCACGCCGTT CGTCTCACCC GCGTCACCGC AATGACCGAT
CCGCTCGGTG GTCAGTTTGC CGATCCGCCA TCCAACCAGC CGGTGGCCGT AACCGAAATT
GAGTGGACGG ACGAAGATGC GTTGCCATTC ATCCTTGATC TGACGGTGGT AGCAGTGCCG
CCCGCTGATC GCGACGAGAG CGGAGTAGCG CGCCAGCCGG CCAGTGTGGC GTTGGGCAAT
ATTGTGCTGG CCGATCACGG TGAAACCCTC CCCGCCGAGT TGTTGCCGCC GGTCGGCGAT
CCGCTTCGCT ACCGGCCAAA ACTGGCACGG GCCGGCGTGA CCTTTGCCGC GCCGTTCGAT
CCAACCAATC GGGTGACGCC GGCAGTACGT TTAGTGAGCG ACATTGCACC ATCGCTAACC
CTACCTGCCG TGACCCTGAC GAGTGCTTCC GGTTTGTGGC AGCCGGTGCC CGATCTACTC
AGCAGTAATC GCTTTCAAAC CGAATTTGTC GGCGAACTGG AGAACGACGG TCGCCTGTTC
CTGCGCTTTG GCGATGGCCG CACGGGGCGC GTGCCGGCGG CAGGCGAAGC GTTGGTGGCG
CACTACCGGG TAGGTGGTGG CTCTGCCGGT AATATTGGCG CCGATGCGCT GGCACACATT
GTTACCAACG AGAGCGGTAT TCGCGCAGTA CGCAACCCCT TGCCGGCCCT CGGCGGCAGC
GAGCCAGAGG CGCTTGAGGC GATCCGCCAG TCTGCGCCGC AAGCCTTTCG TCGCCAAGAA
CGGGCGGTGA CGCCGGCTGA TTACGCGACG ATGGCCGAAC GTCATCCATC CGTGCAGCGT
GCGGTTGCTA CCCGCCGCTG GACGGGGAGT TGGTACACGA TCTTTATTAC CGTTGATCGA
CGTGATGGCT TGCCGGTTGA TGCAGCATTT GAAGCCGACC TGCGCGCTTT TCTCGAACGC
TACCGGATGG CCGGGCAAGA TGTCGAGATT GACGGTCCGA TCTATGTGCC GCTCGATCTG
GCGTTTGTGG TCTGTGTCGA GGCTGGCTAT TTCACCGCCA ATGTCAAGGT TGCGCTGCTC
GAACGTTTCA GCGCTCGCCA GTTTTTTCAC CCCGACAACT TTACCTTCGG CCAACCGCTC
TACCTCAGCC ACATCATCGC CGCTGCCATG GCCATTCCCG GCGTGCGCTG GATCGAGACG
GCGGGAACGC GGGTGCGTTT CCAACGCTGG GGTAAACCGC CGCGCGGCGA GTTGGTCAAC
GGCCAACTTG ATGTTGGCCG GCGCGAGATT ATCCGCTGTG ATAACGACCC TAACCGGCCT
GAACATGGTC GGATCGAGTT CATCATGGAG GGCGGGTCAT GA
 
Protein sequence
MSIQFRCANP RRAQVLSTSA IPLNGIDLLE VLDRDAPAGV SPQQTLLVQM IKPAPWGLGA 
ANVQLTGGVR VTGVKVRWVL RAADASSADV AAGRITGAER TFYNGLSAAD RTLVVRVDQA
GDFSTYTLRL VRSPTDPSPP AGFDPILSRI TFSFKVDCPS EFDCAPVSDC PLEDDGTPPI
DYLARDYASL RQLLFDRLAA VSPTWRERNP ADLGVAIVEG LAYIGDYLSY YQDAVATEAY
LGTARRRVSL RRHARLLDYV PHDGANARVW VQVQVDAPCT LPARTPVLTK VGGAPPRLLP
ASAELALARQ QQPLVFETMH DIRLDPALNQ IDFYTWGDEG CCLPVGTTRA TLRGDLSSRL
HSGDVLAFIE QRSPITGYRA DADPARRHAV RLTRVTAMTD PLGGQFADPP SNQPVAVTEI
EWTDEDALPF ILDLTVVAVP PADRDESGVA RQPASVALGN IVLADHGETL PAELLPPVGD
PLRYRPKLAR AGVTFAAPFD PTNRVTPAVR LVSDIAPSLT LPAVTLTSAS GLWQPVPDLL
SSNRFQTEFV GELENDGRLF LRFGDGRTGR VPAAGEALVA HYRVGGGSAG NIGADALAHI
VTNESGIRAV RNPLPALGGS EPEALEAIRQ SAPQAFRRQE RAVTPADYAT MAERHPSVQR
AVATRRWTGS WYTIFITVDR RDGLPVDAAF EADLRAFLER YRMAGQDVEI DGPIYVPLDL
AFVVCVEAGY FTANVKVALL ERFSARQFFH PDNFTFGQPL YLSHIIAAAM AIPGVRWIET
AGTRVRFQRW GKPPRGELVN GQLDVGRREI IRCDNDPNRP EHGRIEFIME GGS