| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1479 |
|---|
| Symbol | |
|---|
| ID | 7269313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 1812587 |
|---|
| End bp | 1813792 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643566321 |
|---|
| Product | elongation factor Tu |
|---|
| Protein accession | YP_002462820 |
|---|
| Protein GI | 219848387 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0050] GTPases - translation elongation factors |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.008881 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAC AGAAATTTGA GCGGACGAAA CCGCACGTCA ACGTCGGCAC CATCGGCCAC
GTCGACCACG GGAAGACGAC GCTGACCGCA GCCATTACCA AGGTGCTCTC CCTCAAGGGC
GCCGCCCAGT TTATGGCGTA TGACCAGATC GACAACGCGC CCGAAGAGCG CGCCCGTGGT
ATTACCATCG CTATTCGCCA CGTCGAGTAT CAGACCGACA AGCGCCACTA TGCCCACGTC
GACTGCCCCG GTCACGCCGA CTATATCAAG AATATGATTA CCGGCGCAGC CCAAATGGAC
GGGGCCATCC TCGTGGTGAG CGCGCCCGAC GGCCCGATGC CGCAGACTCG TGAGCACATC
CTGCTGGCGC GCCAGGTGCA GGTGCCGGCC ATCGTTGTCT TCCTCAACAA GGTAGATATG
ATGGACGACC CGGAGTTGCT CGAGCTGGTC GAGTTGGAGC TGCGCGAGCT GCTGAGCAAG
TACGGCTTCC CCGGCGATGA GATTCCGATT GTGCGAGGCA GCGCCCGCAA TGCGCTGGAA
AGCCCGAGCA AGGATATCAA CGCGCCGGAG TATGCCTGCA TCCTTGAGCT GATGAACGCG
GTCGATGAGT ACATCCCGAC GCCGCAGCGG GCGGTTGACC AGCCGTTCCT GATGCCGATT
GAAGACGTGT TCGGGATTAA GGGCCGCGGT ACGGTGGTGA CGGGCCGCAT CGAGCGCGGC
AAGGTGAAGG TCGGAGACAC GGTCGAGATT GTGGGAATGA CCGACGAAGC GCCGCGGCGA
ACGGTGGTGA CCGGCGTGGA GATGTTCCAG AAGACACTCG ATGAAGGGAT TGCCGGCGAC
AACGTGGGCT GTCTGCTGCG TGGCATTGAG CGGAACGAGG TAGAGCGCGG GCAAGTGTTG
TGCGCGCCGG GGAGCATCAA GCCGCACAAG AAGTTTGAGG CGCAGGTCTA CGTGTTGAAG
AAGGAAGAGG GTGGGCGCCA CACGCCGTTC TTCTCCGGCT ACCGACCACA GTTCTACATC
CGCACCACCG ATGTAACGGG GGCGATTAGC TTGCCGGCGG GGATGGAGAT GGTGATGCCG
GGCGACAACG TGGTGATGAC GATTGAGCTG ATTGTGCCGG TGGCGATTGA AGAGGGCCTC
CGCTTCGCCA TCCGTGAGGG TGGGCGCACC GTCGGTGCAG GTGTCGTCAC TAAGATCCTT
GATTAA
|
|---|
| Protein sequence | MAKQKFERTK PHVNVGTIGH VDHGKTTLTA AITKVLSLKG AAQFMAYDQI DNAPEERARG
ITIAIRHVEY QTDKRHYAHV DCPGHADYIK NMITGAAQMD GAILVVSAPD GPMPQTREHI
LLARQVQVPA IVVFLNKVDM MDDPELLELV ELELRELLSK YGFPGDEIPI VRGSARNALE
SPSKDINAPE YACILELMNA VDEYIPTPQR AVDQPFLMPI EDVFGIKGRG TVVTGRIERG
KVKVGDTVEI VGMTDEAPRR TVVTGVEMFQ KTLDEGIAGD NVGCLLRGIE RNEVERGQVL
CAPGSIKPHK KFEAQVYVLK KEEGGRHTPF FSGYRPQFYI RTTDVTGAIS LPAGMEMVMP
GDNVVMTIEL IVPVAIEEGL RFAIREGGRT VGAGVVTKIL D
|
|---|
| |