Gene Cagg_1477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1477 
Symbol 
ID7269311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1811701 
End bp1812264 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content49% 
IMG OID643566319 
ProductNusG antitermination factor 
Protein accessionYP_002462818 
Protein GI219848385 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0560518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGG AAAAAAACAA AGACAAAGAG GCCGATGATC GGCGCTGGTA CGTGATCCAT 
ACGTATTCAG GCTACGAAAA CAAAGTCAAG AAAAATCTGG AGCATCGTAT CGCTTCAATG
GAGATGCAAG ACCAGATTTT TCGGGTGATT GTGCCGACTG AAGAAGAGAT TGAGATTAAA
AACGGCCAAC GTCGCACGGT CAATAAGAAA ATCTATCCCG GGTACGTGCT GGTGCAAATG
CGCCTGACCG ACGACTCGTG GTACGTGGTT CGCAATACAC CGGGAGTTAC GAGCTTTGTC
GGGCATGGGA ATAAACCAAC GCCACTGGAT GATGAAGAGG TAAAAGCTAT CCTGCGCCAA
ATGGAAGGTG AAACACCTAA AGTGCGTGTT AGCTACCAGA AGGGGCAGGC AGTTAAGATT
ATCGATGGTC CGTTCACCGA TTTTGAAGGG ATCGTCGATT CTATCGACCA CGAGCGTGGT
CGGGTGCGCG TACTGGTCTC GTTCTTTGGT CGGGAAGCGC CGGTTGAGCT TGATTTCTTG
CAGGTAACGA AACTGGTTGA GTAG
 
Protein sequence
MSEEKNKDKE ADDRRWYVIH TYSGYENKVK KNLEHRIASM EMQDQIFRVI VPTEEEIEIK 
NGQRRTVNKK IYPGYVLVQM RLTDDSWYVV RNTPGVTSFV GHGNKPTPLD DEEVKAILRQ
MEGETPKVRV SYQKGQAVKI IDGPFTDFEG IVDSIDHERG RVRVLVSFFG REAPVELDFL
QVTKLVE