Gene Cagg_1470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1470 
Symbol 
ID7269303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1804095 
End bp1804976 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content54% 
IMG OID643566312 
Producttransposase IS4 family protein 
Protein accessionYP_002462811 
Protein GI219848378 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0460218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGTC TAATCGAGTT GTTCTGTGAT GTCGATGATT GTTGCCAGTC TTTGCTGCCT 
GTGTGGCGGA ACCACTTGTT GAGCGCAGGT GACATTCAGC GGCAGCGTGA AAGAAGCCTG
AGCGTGAGTG AGCTCATGAC CATTTTGATC CATTTTCATC AGTCACACTA TCGTCATTTC
AAAGCGTCCT ACACCGACTA TGTGCTGGAA CGCCTGCGCG CTGCATGTCC TGGTCTGGTC
AGATATAACC GTTTTGTCGC GTTGATTCCT TCCGTTCTGG TTCCGTTGTG TGGGTACCTG
CGCCCACGCT GTTTCGGAAC GTGTACAGGC ATTGCGGGTA TCGATGCAAC TGCTCTGGCG
GTCTGCAACA ACCCCAGAAT CCACGCTCAT AAGGTCTGTG CTGGATTGGC AGCGCGTGGC
AACACCGCCA CTGACTGGGT GTTCGGCTGC AAACGTCATC TGGTTTGCAA CGACCGTGGC
GAATTCCTCA ATCGGATGCT TACTCCAGGC AATGTGGATG ACCGTAAACC GGTTCCCACG
TTGGTGCGCA AACGCTTTGG TACATTGTTC GGCGCCAAAG GCTCCCTCTC CAAGGCGCTC
CGTGACGAAC TCTTCCGCAC GTTCAGCGTC GAACTGGTCC CTGGTGTTCG CTCGCACATG
AAGCATGCGC TTATGCTGCT GATGGACAAC ATCCTGCGTC GCAAACGGGC GATTGTGGAA
ACCATTATTG ACCAACGCAA GAACATTGCG CAGATTGCGC ATGCACGCCA CCGAAGTCCA
GTCAACGTTC TCGTCAATCT GCTTTGCGGC GTGATCGCGT ATTGTCGCCA GCCCAAGAAA
CCCTCGCTCG GCTTGGGAAC CTTGCCCGCT TTGATCGCCT AA
 
Protein sequence
MDSLIELFCD VDDCCQSLLP VWRNHLLSAG DIQRQRERSL SVSELMTILI HFHQSHYRHF 
KASYTDYVLE RLRAACPGLV RYNRFVALIP SVLVPLCGYL RPRCFGTCTG IAGIDATALA
VCNNPRIHAH KVCAGLAARG NTATDWVFGC KRHLVCNDRG EFLNRMLTPG NVDDRKPVPT
LVRKRFGTLF GAKGSLSKAL RDELFRTFSV ELVPGVRSHM KHALMLLMDN ILRRKRAIVE
TIIDQRKNIA QIAHARHRSP VNVLVNLLCG VIAYCRQPKK PSLGLGTLPA LIA