| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1467 |
|---|
| Symbol | |
|---|
| ID | 7269300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 1801216 |
|---|
| End bp | 1802154 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643566309 |
|---|
| Product | ribose-phosphate pyrophosphokinase |
|---|
| Protein accession | YP_002462808 |
|---|
| Protein GI | 219848375 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
|---|
| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000329774 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGTC GTCTGCTGAT TTTTACCGGC AACGCCAATC CGGCGTTAGC CCAAGAGATT
GCCCGCAACC TGCGCATCAA TCTTGGGCGG GCGCTCGTCG GCACCTTCAA AAACGGCGAG
ACACGGGTCA AGATCCACGA TAACGTGCGC GGCTGTGATG TGTTTGTGAT CCAGCCAACC
TGCACCCCCG TCGATCACCA TCTTATGGAA CTGCTGATCA TGATCGACGC TTTTCGCCGA
GCATCAGCCG CTCGGGTGAC AGCAGTTATT CCCTACTACG GCTACGCCAA GCAAGAGAAG
AAGACGTCAG GCCGCGAGCC AATTACGGCA AAGCTGGTGG CGAACCTTAT TCGCACCGCC
GGCGCCGACC GCGTCTTGAC GATGGATCTG CACGCACCGG CAATTGAGGG CTTTTTCGAT
ATTCCGGTCG ACCACTTACA AGCCTCCCCA TTATTGGCCG ACTATATTCG CGACCTCAAC
TTACCGAACC CGGTGGTTGT CTCGCCGGAT ACCGGTGGTG TGGGTAGGGC CAACCGCTTC
CGCGAACGGA TCGGGGCCGG CCTCGCTATT ATCGCTAAGC AGCGCCCAGA GCCGGACACG
GCTGAAGTCA TTGAGATGGT TGGTGAGGTC GAAGGCAAAA CGGCGATTAT CGTCGATGAT
ATGATCTCGA CCGGCGGTAC CCTGATCGAA GCAGCCCAAA CGCTCTTGGC GCGTGGAGCG
CGTGCGGTCT ATGCCTGTGC AACCCACGGT ATCTTTGCCG ATGATGCGCT GAAACTGATC
GCTCAATCTG ACCTGATCGA GACGATTGTC ACCAATACCA TTCCACAACC ACCTGAAGCT
GCTGCGGCTC GCGTGCGCAC TATTAGCGTC GCACCGCTAT TCGCCGAAGC TATTATGCGC
ATCCATAAGG ATCTCTCGCT CAGCGCGCTT TTTTCTTGA
|
|---|
| Protein sequence | MDGRLLIFTG NANPALAQEI ARNLRINLGR ALVGTFKNGE TRVKIHDNVR GCDVFVIQPT
CTPVDHHLME LLIMIDAFRR ASAARVTAVI PYYGYAKQEK KTSGREPITA KLVANLIRTA
GADRVLTMDL HAPAIEGFFD IPVDHLQASP LLADYIRDLN LPNPVVVSPD TGGVGRANRF
RERIGAGLAI IAKQRPEPDT AEVIEMVGEV EGKTAIIVDD MISTGGTLIE AAQTLLARGA
RAVYACATHG IFADDALKLI AQSDLIETIV TNTIPQPPEA AAARVRTISV APLFAEAIMR
IHKDLSLSAL FS
|
|---|
| |