Gene Cagg_1464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1464 
Symbol 
ID7269296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1796220 
End bp1797566 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content56% 
IMG OID643566306 
Productaminotransferase class-III 
Protein accessionYP_002462806 
Protein GI219848373 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0160] 4-aminobutyrate aminotransferase and related aminotransferases 
TIGRFAM ID[TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000155661 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTC ACACCGAAAA GGCGCGCATG CCTGCCGATT ATATGCCCGA ATCGGTTCCC 
GGCCCGCTTG CTCAAGCTCT CATAGCGCGT GACAATGAAG TCATTGCCCC GCTCGGTCGG
GTGTACCCGC TCGTGATCGA CCATGCCCAA GGGTGCGAAG TTTGGGATGT CGATGGGAAT
CGCTTTCTCG ACATGAATGC AGGCATTGCA GTACTGGCAG CCGGTCACTG TCATCCACGT
CTGATTAAGG TAGCCCACGA TCAATTGCAG CGATTCACCC ATATGGCGGG TACCGACTTC
TACAACGAGC CGATGGTACG GGCTGCCGAG AAGCTTGTGT CCTTAATGCC CGGTGGAAAA
GGCTGGCAAG TCTTTTTTAC CAACAGTGGC ACCGAGGCAG TTGAGGCAAG TATCAAACTG
GCTCGTTATG TAACCGGGCG GCAGAATATC ATCGCGTTTT ACGGTGCGTT TCACGGACGG
AGCTACGGTA GTCTCTCACT AACCGCCTCG AAGCCTCGCC AGCGTCGTGG CTTTTTTCCG
TTGTTACCCG GTGTGAGCCA TACTTTCTAC CCGAATTGTT ACCGTTGTCC GATCAATCGC
CAATTCCCGT CGTGTGAAAT CGCCTGTCTT GATGTGATCG AGAACGTATT GTTCAAAACC
ACTACCCCCC CAGAAGAGGT AGCGGCTATT ATTATCGAAC CGATTCAAGG CGAAGGGGGC
TATGTTGTGC CACCGCCCGA TGCATTATCT CGGTTACGCG CCATCTGCGA CCGCTACGGT
ATCTTGCTCA TCGTTGATGA GGTGCAGAGT GGGGTAGGAC GTACCGGGAA GATGTGGGCG
TTCGAGCATG AGGGGATTGT ACCGGATATT GTCGCCTTGG CTAAGGGGTT GGGCGGTGGA
TTGCCGCTCG GCGCGATGAT TGCCCGCACC GAGCTGGCTC GCCGGTGGCA GCCCGGCTCG
CACGGCAATA CCTACGGTGG CAATGGCCTG ACGTGTGCGG TGGCGTATGA ATTGCTCTGT
ATGGTTGAAG AGGAATTGAT GGCCAATGCT GCCGATGTCG GTACGTATTT GCTCACGCAA
CTGCAAGCGT TGCAGCAGCG CTTTCCGCAG ATCGGTACGG TGCGCGGACG TGGATTGATG
ATCGGGGTGG AGTTTGTGAA CGCACAGGGT GAACCTGACG GCCCATTAGC CGATACCGTG
ATGGTTGAGA GTTTTCGCAA GGGCTTGCTG GTGTTGACAT GTGGCGCCTC GACGATTCGG
TTCTGCCCAC CGCTTATTCT TACTAAGGCA CAAGCTGATG AAGCAGTCGC GCGCTTTGCC
CTCGCTATCG AGGCGTGCGT CGCCTAA
 
Protein sequence
MTIHTEKARM PADYMPESVP GPLAQALIAR DNEVIAPLGR VYPLVIDHAQ GCEVWDVDGN 
RFLDMNAGIA VLAAGHCHPR LIKVAHDQLQ RFTHMAGTDF YNEPMVRAAE KLVSLMPGGK
GWQVFFTNSG TEAVEASIKL ARYVTGRQNI IAFYGAFHGR SYGSLSLTAS KPRQRRGFFP
LLPGVSHTFY PNCYRCPINR QFPSCEIACL DVIENVLFKT TTPPEEVAAI IIEPIQGEGG
YVVPPPDALS RLRAICDRYG ILLIVDEVQS GVGRTGKMWA FEHEGIVPDI VALAKGLGGG
LPLGAMIART ELARRWQPGS HGNTYGGNGL TCAVAYELLC MVEEELMANA ADVGTYLLTQ
LQALQQRFPQ IGTVRGRGLM IGVEFVNAQG EPDGPLADTV MVESFRKGLL VLTCGASTIR
FCPPLILTKA QADEAVARFA LAIEACVA