Gene Cagg_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1440 
Symbol 
ID7269272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1771590 
End bp1772105 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content59% 
IMG OID643566283 
ProductRhodanese domain protein 
Protein accessionYP_002462783 
Protein GI219848350 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000930131 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.141829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACATT TTGAACCATC ATCATCTCAG CCACCGGCAT GGCGCCTACC GGCCATCATC 
GGTGGGATTA TCGTGATTGC CGGTTTGTTG GCTTTTTTCA TCACCGGTAC CGGGACAACG
GCACCGAAAG CAACCCCTAC CACCGCCCCT ACCGTTGAGG CGGCAGCAGG GCACGGCGAT
TTGAGCAACA GCCCACCGGC GCCAACTATC TCCGTCACCG AAGCCTACCA GCGTTGGCAG
AACGGGAACG TTATCTTCGT TGATATGCGA TCCGGTGAGG CGTACACTGC CGGCCACTTG
CCCGGTGCGC TCAGTTTGAC AACCCCCGAT CTCAATCAGC GGCTCGCTGC CCTACCGAAA
GATGGACTGA TCATTACGTA TGGTGATGCC AGCCGACCCA CCGCCGGTCA GCGTGGAGCA
CAGATTTTTC GCGACCTCGG CTACGGGCCG GTAGCCGCTC TCGATGGCGG TATTGAAGCG
TGGCAGGCGG CAAACCTGCC GTTGGAGCGA CCATGA
 
Protein sequence
MEHFEPSSSQ PPAWRLPAII GGIIVIAGLL AFFITGTGTT APKATPTTAP TVEAAAGHGD 
LSNSPPAPTI SVTEAYQRWQ NGNVIFVDMR SGEAYTAGHL PGALSLTTPD LNQRLAALPK
DGLIITYGDA SRPTAGQRGA QIFRDLGYGP VAALDGGIEA WQAANLPLER P