Gene Cagg_1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1439 
Symbol 
ID7269271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1770506 
End bp1771495 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content57% 
IMG OID643566282 
Productbeta-lactamase domain protein 
Protein accessionYP_002462782 
Protein GI219848349 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000967067 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.166741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACGG CTCTCCTTCC CAATCTGTAC CAGTTGCGCC TCCCTCTGCC ATTTGCCCTC 
AACCATGTTA ACGTCTATTT GCTCCGGGAT AGTCAAGGGT GGACGGTGGT CGACACCGGT
CTGCACACCT CGGCTGCCGA AACCGGTTGG CAGACGGCGT TTGCCGAATT GGGGATCGCT
CCCCATCAGA TTCATACCAT TGTTCTCACC CATTTTCATC CCGATCATTT CGGCATGGCC
GGTTGGCTTC ACGAACGCTC TGGCGCACGA GTCCTTCTCG CCCCGCGTGA GATTGCATTG
GCCGAAGAGG TATGGATCCA TCGCGCCGAC CATGATGATC CTAGTTTACG TCATTTTCTG
CGCCATGGTA TGCCGGTCGA GCTGGTGAAA CAAGTTGTCG GTGCGATTGC GCTGTTACGT
GCCGGCACCC GCCCTCATCC ACCGTTGACC CCTCTACCGG CCGGTACGTG GCTGACCATG
GGCGAGCGGC GCTTCATCAC CATTCATGCC CCTGGTCACA GCGATGGCCA GCTCATCTTT
TATGCACCCG ACGATCGGCT TGCCTTAGTA GGCGACCAAG TCTTGCAGAA GATCACGCCG
CATATTGGCG TATGGCCGGA GAGTGATCCC GATCCGTTAC GCAAGTATCT CGCATCGCTG
CGTGAATTAG CGACCCTCGA TGTCGATCTG GCCTTGCCCG GTCATGGAAA GACTATTGCT
GCGTGGCAGG AACGAATTGC CGAACTGCAA CATCACCACC AGAACCGTCT TGAGGCCATG
CTCCGGGCAG TACAGGATGG CGCCGAAACG GCCTTTACCG TTGCGCAACG GGTCTTCGAT
GTCGAGCGCT TCACCCCACA CGAAGCCCGT TTTGCGATTG CCGAGACAAT TGCCCATCTC
GAATTACTGG TTGCAGATGG CATGCTCGAA CGCCACGACG ACGAGGCATT GGTGCGTTAC
CGGCCGAGAG TATCGTTTGC CAATCTGTAA
 
Protein sequence
MITALLPNLY QLRLPLPFAL NHVNVYLLRD SQGWTVVDTG LHTSAAETGW QTAFAELGIA 
PHQIHTIVLT HFHPDHFGMA GWLHERSGAR VLLAPREIAL AEEVWIHRAD HDDPSLRHFL
RHGMPVELVK QVVGAIALLR AGTRPHPPLT PLPAGTWLTM GERRFITIHA PGHSDGQLIF
YAPDDRLALV GDQVLQKITP HIGVWPESDP DPLRKYLASL RELATLDVDL ALPGHGKTIA
AWQERIAELQ HHHQNRLEAM LRAVQDGAET AFTVAQRVFD VERFTPHEAR FAIAETIAHL
ELLVADGMLE RHDDEALVRY RPRVSFANL