Gene Cagg_1430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1430 
Symbol 
ID7269262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1759699 
End bp1760865 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content56% 
IMG OID643566273 
Producthypothetical protein 
Protein accessionYP_002462773 
Protein GI219848340 
COG category[S] Function unknown 
COG ID[COG1470] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.81814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCCA TTCGCATCAT CAGTATGCTC GTACTCGTAC TATTAATGAT GGTAGGATTC 
ACACCGGTAT CAGCGCAAGA AAACCAACGC AACCTCTTCT TTTACACCCG CTACCCTTCC
CAAGAAGCCA CCATTGGAGA CATCGTCACC TTCAAACTAA CCCTCGGTAC CGATACAACC
CCACAGATCG TCCAGCTCGG TATGCGAGAA GTACCGCAAG GTTGGAATGT CACCTTCCGC
GGCGATGGGA GGGTCATTTC TTCGGCATAC GTCGAACCCA ACAATAACGC CACGTTCGAC
TTGCGGATCG AACCTCCGGC TGATGTGAAG GCCGGCTCGT ACCGCATGGT CGCGGTAGCA
AGCGGTGTAG GCCAAGAGGT TACCCTTCCG ATTGCTTTAA CTCTCAAAGA GAAGAGCACC
AATCCGGGTG GATTATCGTT CAAAGTTGAT CTCCCCACCC TCCGCGGCTC ACCCTCGACT
ACATTCCGCT ATAACGTCAC CCTCAAGAAC GAGAGTAGTG AAGAGGTGCC GGTGAGCTTA
CTGGCCGACG CACCGCGTGG TTTTCAAGTC GATTTCAAAT TATCAGGGCA GAGCATTACC
AGCGTGCCAT TCGGACCCAA CGAGTCGAAG AGCTTGAGTG TTGAGGTACG GCCGTTCAGT
GATGTGCCCG CCGGTACCTA TGAAATCGGC ATTCTCGCAC GTGGCAACGA TTTGCAGGCT
ACTACCCGCC TGATCGCCGA TATTACCGGC CAACCCCAAC TACTGCTCAC CACTCCCGAT
GGCCGCTTGT CGGGTGAAGC CCGGATCGGC GAAAAGACTG AAGTGAAGCT CGTCGTGAGT
AATACCGGCA GCGCCCCGGC CCGTGATATT GAACTGAGCG CTTCGCCACC CATAGGCTGG
ACGGTTGAGT TTGAGCCGAA ACAGATTCCC GAATTGGCCA ATGGTCAGCA GATTGAAGTG
AGTGCGAAGG TACAGCCGTC GAATCAGGCT ATCGCCGGTG ATTATCTCGT AACCTTCACC
GCCCGTCCCA CCGATGCGGC GGCTGCCACC AGTGAGTTCC GTTTCACCGT GCTGACCTCG
ACCATTTGGG GCCTGGTGGG GATCGCGTTG ATCGCAATCG CTGTGGTGGG CGTAGGTATG
GCGGTCATGC GATTTGGTCG CCGGTAA
 
Protein sequence
MRAIRIISML VLVLLMMVGF TPVSAQENQR NLFFYTRYPS QEATIGDIVT FKLTLGTDTT 
PQIVQLGMRE VPQGWNVTFR GDGRVISSAY VEPNNNATFD LRIEPPADVK AGSYRMVAVA
SGVGQEVTLP IALTLKEKST NPGGLSFKVD LPTLRGSPST TFRYNVTLKN ESSEEVPVSL
LADAPRGFQV DFKLSGQSIT SVPFGPNESK SLSVEVRPFS DVPAGTYEIG ILARGNDLQA
TTRLIADITG QPQLLLTTPD GRLSGEARIG EKTEVKLVVS NTGSAPARDI ELSASPPIGW
TVEFEPKQIP ELANGQQIEV SAKVQPSNQA IAGDYLVTFT ARPTDAAAAT SEFRFTVLTS
TIWGLVGIAL IAIAVVGVGM AVMRFGRR