Gene Cagg_1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1428 
Symbol 
ID7269260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1758446 
End bp1758958 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content55% 
IMG OID643566271 
ProductNUDIX hydrolase 
Protein accessionYP_002462771 
Protein GI219848338 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.516023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAATA CATCGGTGAC AATGCTACAC GCACTTCGTG AATTCGCACT TACCGGGGCC 
TACAACCTCT TCCTCCGCCT ACGCCGGGCC ACGCAGTTTA TCTTGCGCCC GCGTGCGATT
GGGGTGCGGG TAATCGTGCA ACGTGGTGAT GAGTTCTTGT TAGTACGTCA TCGCGGAGGG
AAAAAACCGT GGGGTTTACC CGGTGGTGCG ATTGACCGTG GCGAAGCGCC GGTAGAAGCC
GCTCGTCGTG AGGCGTTTGA GGAAAGTGGC TGTTCAGTGA AGATTACCGG TCTACACGGT
GTTTTTCACT ATTTTGCGCA TGGTCTGAGT GACTACATTA TCGTTTTCAC GGCGGTCGCC
GATAGTCCGC CGTCACCACC TCGCGGCGAC ATCGAAATCT GTGATGCCCA ATGGTTTCAC
GCTGACCGTC TCCCGACCGG TATTGAGGCT GGGAGTATGC GTCGAATTAT GGAAGTACGT
CGCGGTGAGC ATCATCTCTA TCGGGCGTGG TAA
 
Protein sequence
MLNTSVTMLH ALREFALTGA YNLFLRLRRA TQFILRPRAI GVRVIVQRGD EFLLVRHRGG 
KKPWGLPGGA IDRGEAPVEA ARREAFEESG CSVKITGLHG VFHYFAHGLS DYIIVFTAVA
DSPPSPPRGD IEICDAQWFH ADRLPTGIEA GSMRRIMEVR RGEHHLYRAW