Gene Cagg_1427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1427 
Symbol 
ID7269259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1757856 
End bp1758353 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content57% 
IMG OID643566270 
ProductNUDIX hydrolase 
Protein accessionYP_002462770 
Protein GI219848337 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.145192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTACA CGCCAATTCT CGCCACCCTT GGTTACGTTC TTTCGCCCGA TCGTCAATCG 
GTGCTGATGG TGCATCGTAA TGCGCGACCC GAAGATCAAC ATTTGGGCAA GTACAATGGT
CTGGGCGGTA AGCTGGAACG TGACGAAGAG ATTGTTGCCG GGATGCAGCG CGAATTGCGC
GAAGAGGCCG GTATTACTGC TCTCGAACTC ACCCTGCGGG GGACGGTCAG TTGGCCCGGT
TTTGGTAAGA ACGGCGAAGA CTGGTTTGCC TTCATCTTTT TAATTACCCG TTTTGACGGT
GAGCCACCGA CACGTAATGT CGAAGGAACC CTGGAGTGGG TACCGTTGGC ACGGATTATG
GATTTGCCAC TCTGGCCCGG CGACCGATAC TTTCTCCCGC TCGTGTTCGA CGATGATCCG
CGTCCATTCC ACGGCGTGAT GCCCTACGCC AACGGCCAAC CGGTAGCGTG GCGCTACAGC
CGTGTACGTG GATCGTGA
 
Protein sequence
MPYTPILATL GYVLSPDRQS VLMVHRNARP EDQHLGKYNG LGGKLERDEE IVAGMQRELR 
EEAGITALEL TLRGTVSWPG FGKNGEDWFA FIFLITRFDG EPPTRNVEGT LEWVPLARIM
DLPLWPGDRY FLPLVFDDDP RPFHGVMPYA NGQPVAWRYS RVRGS