Gene Cagg_1426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1426 
Symbol 
ID7269258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1756480 
End bp1757760 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content56% 
IMG OID643566269 
Productseryl-tRNA synthetase 
Protein accessionYP_002462769 
Protein GI219848336 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0522014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGACA TCAAACTCAT CCGCGAGCAG CCCGATGAAG TAAAACGCCA ATTGGCTCGC 
TGTGGTGTTG ACGGTGCAAT CATCGATCAG GTGCTAGCCT TCGATGAGCA ACGGCGTCGT
CTGATTTACG AAGTTGAAAC GCGCAAAGCA GAGCGGAATG CGGTCTCGAA GCAGATTGGT
GCAATGAAAG ATCAAGCCGA GCGACAGGCG AAGATTGAGG CAATGCGCCG ATTGGGTGAT
GAGATCGCCG AACTCGATCG CCAACTCGCC GCCGTTGAAG AGCAGCAACG GGCAGCAATG
TTGGAGATTC GCAACCTCCC GCATCCTGAT GTCCCCGATG GCGTTGATGA ACACGATAAC
GTGGTTGTCT ATCAAGAGGG AGAAGAACGT CAACTGCCGT TTCCCGCTCG CCCACACTGG
GAGCTTGGTG AAGCGTTGGG CATTCTCGAC TTCGAGCGGG GCGTCAAGTT GGCCGGATCG
CGGTTTTACG TGATGCGTGG TGCCGGTGCG CGGCTGCAAC GTGCGGTGAT CCAGTGGCTG
CTCGATCTCC ATTTGCGGCA GGGTTACCAA GAGATCTATA CACCGTTTGT GGTGAAAGAG
TCGGTGTTGT GGGCTTCGGG ACAGTTACCG AAGTTCCGTG ATAATCTCTA CCGTGATGAG
GAGTCGGGTT TGTGGCTGGT GCCGACGGCG GAAGTGCCGC TGACCGGTCT CTACGCCGAC
GAGATTCTGG AGGCGAGTCA GTTGCCGATC TACCACGCCG CCTATACGCC TTGTTTTCGG
AAAGAACAGT TGAGTGCCGG GCGTGATGTG CGGGGGATCA AGCGCGGTCA CCAATTTGAT
AAGGTTGAGA TGTACATGTT CGTGAAGCCG GAAGAGAGTT ATCAGGCGCT CGAGAAGTTG
CGTCGTGATG CCGAAGAGTG TGCGCGCTTG CTCGGTTTGC CGTTCCGCAC GAAGCTGCTC
TGTACGGCTG ATCTCGGGTT TGGTTCAACG AAGACCTACG ATATTGAGGT ATGGGCGCCG
GGCGTGGGGG AGTGGCTTGA AGTCAGCTCA TGCTCTAACG TTGAAGCGTT TCAGGCTCGC
CGTGCCAATA TACGCTACCG GCCCGAACCG GGTGCCAAGC CAGAGTTTGT CCATACGCTG
AATGGATCAG GCCTTGGATT GCCGCGCACG ATTATCGCGA TTATGGAGAA TTATCAACAG
GAAGACGGCA GTATTCTGAT TCCCGAGGTG TTGCGCCCGT ATATGGGTGG GATGGAACGG
ATTGTGAACG AAGCGGCGTA A
 
Protein sequence
MLDIKLIREQ PDEVKRQLAR CGVDGAIIDQ VLAFDEQRRR LIYEVETRKA ERNAVSKQIG 
AMKDQAERQA KIEAMRRLGD EIAELDRQLA AVEEQQRAAM LEIRNLPHPD VPDGVDEHDN
VVVYQEGEER QLPFPARPHW ELGEALGILD FERGVKLAGS RFYVMRGAGA RLQRAVIQWL
LDLHLRQGYQ EIYTPFVVKE SVLWASGQLP KFRDNLYRDE ESGLWLVPTA EVPLTGLYAD
EILEASQLPI YHAAYTPCFR KEQLSAGRDV RGIKRGHQFD KVEMYMFVKP EESYQALEKL
RRDAEECARL LGLPFRTKLL CTADLGFGST KTYDIEVWAP GVGEWLEVSS CSNVEAFQAR
RANIRYRPEP GAKPEFVHTL NGSGLGLPRT IIAIMENYQQ EDGSILIPEV LRPYMGGMER
IVNEAA