Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1426 |
Symbol | |
ID | 7269258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 1756480 |
End bp | 1757760 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643566269 |
Product | seryl-tRNA synthetase |
Protein accession | YP_002462769 |
Protein GI | 219848336 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0522014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTGACA TCAAACTCAT CCGCGAGCAG CCCGATGAAG TAAAACGCCA ATTGGCTCGC TGTGGTGTTG ACGGTGCAAT CATCGATCAG GTGCTAGCCT TCGATGAGCA ACGGCGTCGT CTGATTTACG AAGTTGAAAC GCGCAAAGCA GAGCGGAATG CGGTCTCGAA GCAGATTGGT GCAATGAAAG ATCAAGCCGA GCGACAGGCG AAGATTGAGG CAATGCGCCG ATTGGGTGAT GAGATCGCCG AACTCGATCG CCAACTCGCC GCCGTTGAAG AGCAGCAACG GGCAGCAATG TTGGAGATTC GCAACCTCCC GCATCCTGAT GTCCCCGATG GCGTTGATGA ACACGATAAC GTGGTTGTCT ATCAAGAGGG AGAAGAACGT CAACTGCCGT TTCCCGCTCG CCCACACTGG GAGCTTGGTG AAGCGTTGGG CATTCTCGAC TTCGAGCGGG GCGTCAAGTT GGCCGGATCG CGGTTTTACG TGATGCGTGG TGCCGGTGCG CGGCTGCAAC GTGCGGTGAT CCAGTGGCTG CTCGATCTCC ATTTGCGGCA GGGTTACCAA GAGATCTATA CACCGTTTGT GGTGAAAGAG TCGGTGTTGT GGGCTTCGGG ACAGTTACCG AAGTTCCGTG ATAATCTCTA CCGTGATGAG GAGTCGGGTT TGTGGCTGGT GCCGACGGCG GAAGTGCCGC TGACCGGTCT CTACGCCGAC GAGATTCTGG AGGCGAGTCA GTTGCCGATC TACCACGCCG CCTATACGCC TTGTTTTCGG AAAGAACAGT TGAGTGCCGG GCGTGATGTG CGGGGGATCA AGCGCGGTCA CCAATTTGAT AAGGTTGAGA TGTACATGTT CGTGAAGCCG GAAGAGAGTT ATCAGGCGCT CGAGAAGTTG CGTCGTGATG CCGAAGAGTG TGCGCGCTTG CTCGGTTTGC CGTTCCGCAC GAAGCTGCTC TGTACGGCTG ATCTCGGGTT TGGTTCAACG AAGACCTACG ATATTGAGGT ATGGGCGCCG GGCGTGGGGG AGTGGCTTGA AGTCAGCTCA TGCTCTAACG TTGAAGCGTT TCAGGCTCGC CGTGCCAATA TACGCTACCG GCCCGAACCG GGTGCCAAGC CAGAGTTTGT CCATACGCTG AATGGATCAG GCCTTGGATT GCCGCGCACG ATTATCGCGA TTATGGAGAA TTATCAACAG GAAGACGGCA GTATTCTGAT TCCCGAGGTG TTGCGCCCGT ATATGGGTGG GATGGAACGG ATTGTGAACG AAGCGGCGTA A
|
Protein sequence | MLDIKLIREQ PDEVKRQLAR CGVDGAIIDQ VLAFDEQRRR LIYEVETRKA ERNAVSKQIG AMKDQAERQA KIEAMRRLGD EIAELDRQLA AVEEQQRAAM LEIRNLPHPD VPDGVDEHDN VVVYQEGEER QLPFPARPHW ELGEALGILD FERGVKLAGS RFYVMRGAGA RLQRAVIQWL LDLHLRQGYQ EIYTPFVVKE SVLWASGQLP KFRDNLYRDE ESGLWLVPTA EVPLTGLYAD EILEASQLPI YHAAYTPCFR KEQLSAGRDV RGIKRGHQFD KVEMYMFVKP EESYQALEKL RRDAEECARL LGLPFRTKLL CTADLGFGST KTYDIEVWAP GVGEWLEVSS CSNVEAFQAR RANIRYRPEP GAKPEFVHTL NGSGLGLPRT IIAIMENYQQ EDGSILIPEV LRPYMGGMER IVNEAA
|
| |