Gene Cagg_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1417 
Symbol 
ID7269249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1745086 
End bp1745826 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content57% 
IMG OID643566260 
Productprotein of unknown function DUF541 
Protein accessionYP_002462760 
Protein GI219848327 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATC GTCTTCTCAC AACCATTCTC GCCTTAACAG CCCTCATCGC CGTACTGGCA 
CTGGCTGCGG TCGGCCTGCT CCGCCCCGCT CAAACTGCTG TTGCCCAACC TGGCGTCAGT
AATATGCCAC AGATTGTTGT GATCGGTACC GGTGAAGTAA AGGTCGAACC TGACATCGCG
ACGGTAACCA TCGGTGTGGA GACCAAAGCC CCGACCACCC AAGAGGCACT CTCCCAAAAT
AGCACGCAGG CGCAGGCGAT CATTGAGCGC ATTCGCCAAC TCGGTATCGA CGCCAAAGAT
ATTCAGACAA CCGGAATCAA CATTTATCCG GTTTATGATG AAAAAGGTCA AGCCATTATC
GCGTACACGG TCAGTAATAT GGTCACGGTC ACCATTCGCA ATCTGGCGCA GGCCGGCAAC
CTGATCGATC AGGTGGTAGA GGTTGGGGCG AATCGGTTGT ATGGGGTAAG TTTTGGATTA
AGTGATCCGG AAGCGATAAT GACGCAGGCG CGCGAGGCGG CAGTTGCCAA CGCACGGGCA
AGGGCCGAGC AAATGGCGCG GGCGAGTGGT GCATCGCTGG GTCGGGTGCT GTTCATCACC
GAGAACTTTG GCGCTAGCCC CATCCCGGTG CCGATGAAGG CCGAAACCTA CAGCGCACCC
GCAGCTCGCT CGGCGCCACC GGTGCAACCC GGCCAGCAAG CCTACAGCGC CTCGGTGCAA
GTAACGTTTG AATTGCGCTA G
 
Protein sequence
MENRLLTTIL ALTALIAVLA LAAVGLLRPA QTAVAQPGVS NMPQIVVIGT GEVKVEPDIA 
TVTIGVETKA PTTQEALSQN STQAQAIIER IRQLGIDAKD IQTTGINIYP VYDEKGQAII
AYTVSNMVTV TIRNLAQAGN LIDQVVEVGA NRLYGVSFGL SDPEAIMTQA REAAVANARA
RAEQMARASG ASLGRVLFIT ENFGASPIPV PMKAETYSAP AARSAPPVQP GQQAYSASVQ
VTFELR