Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1416 |
Symbol | |
ID | 7269248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 1742949 |
End bp | 1744943 |
Gene Length | 1995 bp |
Protein Length | 664 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643566259 |
Product | excinuclease ABC subunit B |
Protein accession | YP_002462759 |
Protein GI | 219848326 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTTC GGATTGAAGC GCCCTATCAG CCGACCGGTG ATCAGCCACA AGCGATAGAG AAACTTGTGG CCGGGTTGCG GGCCGGCTAT CGTCATCAGA CGCTGCTCGG TGCAACCGGC ACCGGCAAAA CGTTTGTGAT GGCGCATATT TTTGCCCAAA TTCAGCGCCC TACGCTCGTG CTTGCCCATA ACAAGACGCT GGTCTCGCAA CTATGGGCCG AGTTCCGTGA GTTTTTGCCT GATGCCGCAG TCGAGATGTT TATCTCGTAC TACGATGAAT ATACGCCCGA AGCCTATGTG CCCTCAAAAG ACCTCTACAT CGAGAAAGAG GCTAGCATTA ATGAAGAAAT CGACCGTCTG CGTCACGCGG CGACCCAAGC ACTGCTGACC CGCCGCGATG TTCTGATTGT CGCTTCGGTT TCGGCGATCT TTGGTCTCGG TTCACCTCAC GACTACGGTC AAGAGAAAAT TCACCTCCGT ACCGGTGAAG TCCGTAACCG CGATAAACTG TTACGCCAAC TGATCGATTT ACAATTCGAG CGTAACGATG TCGATTTTCA ACGCGGTACC TTCCGCGTTC GTGGCGATAC CCTCGATATT ATTCCCGCGA ACGCTGAAAC CGCCATCCGG GTTGAGTTCT GGGGCGATGA GATTGAGCGG ATTGTCGAAC TTGACCCGCT TACCGGAGAG GTGTTGCTGA AGCATACGGC GGTTGAAATT TATCCGGCTA AGCACTTCGT CACCACCAAA GAGAAGCTAC AATTGGCGAT TGTGAGCATC CAAGCCGAGC TGAACGAACG GTTACAAGAA TTAGAAGCTG CCGGCAAGTT ACTCGAAGCG CAACGGCTGA AACAACGCAC GCTGTACGAC CTCGAAATGC TGAGTGAAGT GGGCTACTGT AGCGGGATTG AGAACTATTC GCGCCATCTC GACGGACGCG CACCCGGTCA GACACCGTGG ACATTGCTCG ATTATTTTCC CGATGATTTT TTGATGTTTA TTGACGAAAG TCACATCACC ATTCCCCAGT TGCGCGGTAT GTACAACGGG GACCGTCAGC GTAAACAGAC ATTGGTTGAT TACGGTTTTC GCTTACCGTC GGCACTCGAT AACCGCCCAC TCAAGTTTGA AGAGTTTGAG CAGCACGTCT ATCAGGTGAT CTACGTCTCG GCAACCCCCG GTCCCTACGA GCGAGAAAAG AGTGAACAGA TTGTTGAGCA GATTATCCGT CCGACCGGTC TGCTCGATCC GGAAATCGAG GTGCGCCCGA CGCGCGGGCA AATCGATGAT CTGCTCGGCG AGATACGGCG ACGGGTAGAA CGTAAACAGC GCGTGTTGGT AACGACTCTC ACCAAACGCA TGGCCGAAGA TTTGGCCGAC TACCTCAAAG AGATGGGGGT ACGCACGATG TACCTCCACG CCGATATCGA TACCATCGAG CGGGTAGAGA TTCTGCGTGA TCTGCGGCTT GGAGTGTATG ATGTAGTCGT GGGGATTAAC CTGTTGCGTG AGGGGCTTGA TCTCCCTGAA GTGAGTTTGG TGGCGATCCT CGATGCGGAT AAAGAGGGGT ATCTTCGCTC AGAGACATCG CTTATTCAGA TCATTGGTCG AGCGGCGCGT CATATCGAGG GTAAAGTGAT CATGTACGCT GATACCATCA CCCGTTCGAT GGAAGTCGCC ATTCGTGAGA CGCAACGCCG ACGTGAGATT CAGATGGCGC ACAATGTGCG GCACGGCATT ACGCCGCAAG GAATCGCAAA AGGGGTACGT GATTTGACCG ACCGCATTCG CAAGGTGGCT GAAGAGCGCG GTGAGTACGT GACCACTCCA GAGACCGCCG TACCGGTTGA TTTGCCACGT GATGAAGTGT TGAAGCTGAT CAAAGACCTC GAGAAGCAGA TGAAACAGGC CGCCAAAGCG CTTGCGTTTG AGAAAGCAGC GGCGTTGCGT GATCAGATCG TCGAGCTGCG ACAGGCCTTA GCACTGAGTG AGTAG
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Protein sequence | MPFRIEAPYQ PTGDQPQAIE KLVAGLRAGY RHQTLLGATG TGKTFVMAHI FAQIQRPTLV LAHNKTLVSQ LWAEFREFLP DAAVEMFISY YDEYTPEAYV PSKDLYIEKE ASINEEIDRL RHAATQALLT RRDVLIVASV SAIFGLGSPH DYGQEKIHLR TGEVRNRDKL LRQLIDLQFE RNDVDFQRGT FRVRGDTLDI IPANAETAIR VEFWGDEIER IVELDPLTGE VLLKHTAVEI YPAKHFVTTK EKLQLAIVSI QAELNERLQE LEAAGKLLEA QRLKQRTLYD LEMLSEVGYC SGIENYSRHL DGRAPGQTPW TLLDYFPDDF LMFIDESHIT IPQLRGMYNG DRQRKQTLVD YGFRLPSALD NRPLKFEEFE QHVYQVIYVS ATPGPYEREK SEQIVEQIIR PTGLLDPEIE VRPTRGQIDD LLGEIRRRVE RKQRVLVTTL TKRMAEDLAD YLKEMGVRTM YLHADIDTIE RVEILRDLRL GVYDVVVGIN LLREGLDLPE VSLVAILDAD KEGYLRSETS LIQIIGRAAR HIEGKVIMYA DTITRSMEVA IRETQRRREI QMAHNVRHGI TPQGIAKGVR DLTDRIRKVA EERGEYVTTP ETAVPVDLPR DEVLKLIKDL EKQMKQAAKA LAFEKAAALR DQIVELRQAL ALSE
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