Gene Cagg_1414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1414 
Symbol 
ID7269246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1740491 
End bp1741651 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content52% 
IMG OID643566257 
Productphospholipase D/Transphosphatidylase 
Protein accessionYP_002462757 
Protein GI219848324 
COG category[I] Lipid transport and metabolism 
COG ID[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCA AGCCATCGTC ACGTGCTCAA CCACGTCTCA ACCGCATTCA GATTATCATC 
TTGTTTCTCA CGCTGCTGAT CGGGTTTCTG GTCACTGCCG GCATTATCGA CTTACGGCGA
TTTGGGCTTG ACCCAACCAC GTTTGGGATT GAGACACCAC CTCAACCTGA TAGAAGCGGC
GAGATTACCG TGTATTTTAC CACCCCATAC CTCGTATACC CCGATGTGCC GCGAAACCGT
GTCACACCAC CATTTTTGCA AGATATTTTG CAAGACATAG CGAATGCACG TCAAAGTATC
GATCTGGCAA CGTTTGAATA TACCTTGCCG CCATTGGCCG AAGCCCTCGC GACGGCGCAC
CGTCGTGGTG TGAAAGTACG GGCAGCGCTC GATCGTGAGA GCCTTGAAGA TCCGGTTGAT
GCGAAATTCG CCGGTATTCT TGAAGATGCC GGTATTCCCA TTAGCTGGGA AGATACACAA
GCGTTTCTCC ATAGCAAATT CATTATTATC GATAACCAAA TCGTTTGGAC CGGCTCATGG
AATGCGACTA TCAACGATAC GTATCGCAAC AATAATAATC TGTTGCGGAT TACAATACCT
TCCCTTGTTG AGAATTATCG TGTCGAGTTT GCCGAGATGG CAGCGGGGCG GTTCGGTAAT
AGTAAACAGG CAGTTACACC CTTTTCACGT ATTACCACAC CACAAGCAAC CATCGAAAAC
TATTTTACGC CACGCGAACG ACCGGCTTCC CGCATTGTGG AGCTGATCAA CGGCGCTCGC
CGGTCGGTGC GTTTTATGGC CTTTGCATTT ACCAATGACG AGATTGCCGG TGCGATGATT
ACCCGCCGGC AGGCAGGGGT CACGGTACAG GGCGTGTTTG AACGGCGTAA CGCCGGTGGT
AGCGGTTCTG AGTTTGCCCT TCTCCGTGAC AATGGTGTCG AAGTACTCGA AGACGGAAAC
TGTTACACGA TGCACCACAA GGTGATCATC ATCGATGACC GAATTGTGAT CACCGGTTCC
TATAACTTCA CAGCCCGCGC CGAACGCACG AACGACGAGA ACTTGCTGAT CATCGACGAT
CCGGTGCTCG CCGCAGCCTA CCTGACCGAG TTCGAGCGTG TGTTTACCCA GGCCCAGAAC
CCGCTGCGCT GCCAATCGTG A
 
Protein sequence
MARKPSSRAQ PRLNRIQIII LFLTLLIGFL VTAGIIDLRR FGLDPTTFGI ETPPQPDRSG 
EITVYFTTPY LVYPDVPRNR VTPPFLQDIL QDIANARQSI DLATFEYTLP PLAEALATAH
RRGVKVRAAL DRESLEDPVD AKFAGILEDA GIPISWEDTQ AFLHSKFIII DNQIVWTGSW
NATINDTYRN NNNLLRITIP SLVENYRVEF AEMAAGRFGN SKQAVTPFSR ITTPQATIEN
YFTPRERPAS RIVELINGAR RSVRFMAFAF TNDEIAGAMI TRRQAGVTVQ GVFERRNAGG
SGSEFALLRD NGVEVLEDGN CYTMHHKVII IDDRIVITGS YNFTARAERT NDENLLIIDD
PVLAAAYLTE FERVFTQAQN PLRCQS