Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1392 |
Symbol | |
ID | 7267244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 1717026 |
End bp | 1718273 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643566235 |
Product | glycoside hydrolase family 18 |
Protein accession | YP_002462735 |
Protein GI | 219848302 |
COG category | [R] General function prediction only |
COG ID | [COG3858] Predicted glycosyl hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.282919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGATCG GCACGACAAT CGCCGGAGCA ATCTACATTG GTGCCTTGGT CGTGGCAGGG CTACTGCTCT GGCAGACGGT AGAAATGTCA CGTACCCTCA TCGCGCTCTC GGCCAACGCA TCAACGCCAA CACCGGTACC AACGCCAATA CCGACAGCCG CGCCGTTGTT GGTGTTACCA ACCCCTATCC CACCAACACC CTTGCCTACC ACCGCACCGC CGCAACCGGA AACCTTTGGC TATCACCCCA AGAGCGGGCG ATACATTGCC GTTTGGCTAC CACCGAACTT CACCGGTGAT GCCCGTGAGT CGTTTTTCGC CAACGTTGAT ATTATCGACG ACATCAGTCC ATTCTGGTAC ACAACCGATG CTAGCGGTCG GCTGTACGGG CAGCGCGACG ACGATCTGGT GCGCATTGCC CATGAAAACA ACATACGAAT CATTCCCTCG ATCCACAATG TCGGCAATCC CGGTGCGGTT GTACCGGTGT TAACCAATCC ACAGCTCCGT GCGCGCCATA TTCAGAATAT CGTTGATGAA GTACTGGCTC GCGGCTACGA CGGCATCGAC ATCGACTACG AATCGCTAGA TCCCTCGCTG CGCGACGATT TTACCGCGTT TATCATTGAC CTGGCTGCTG CGCTACACGC ACACAACAAA CTCTTGACCG TCGCCGTTCA TGCTAAAGAC CGTGATGATG GCGGCTTAGG GGCATTCCAA GACTGGCGAG CGATCGGACC GCATGTTGAT CAATTGCGGA TCATGACCTA CGATTATCAT TGGCGCGGCT CAGGACCAGG ACCGGTTGCA CCGGCCTACT GGATTGAAGC GGTAGCCAAT TACGCTCGTG AAGTTGTTGA TCCGGCCAAA GTGTTGATCG GTGTTCATTT CTATGGCTAC GACTGGCCAC CCAACGGCAA CGCAACGGCA CGTCCATGGC GTGTGATCGA GGAGATTATC AACGAGTATC AACCGACGGT AAGCTTCATT GAACGGAATG CACGTGGTCG GGTCGGTGAG AGCACCTTTA CCTATCGCAC GAGCGCCGGT ACGCGCACCG TCTGGTTTAT GACCGATACC GGTCTCGCCG ACAAAATTAC CACCGTGCAG AAGCTTGATC TGGCCGGCAT TGCCATTTGG CAATTGGGGT ACGAACGTCC TGAATATTGG CAAACAGTAC GAACCAATCT CGTGCAGGAT TCAACGTTGA TACAACGCGC ATTAAACACC TTGTTACCAG ACCCCTAG
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Protein sequence | MRIGTTIAGA IYIGALVVAG LLLWQTVEMS RTLIALSANA STPTPVPTPI PTAAPLLVLP TPIPPTPLPT TAPPQPETFG YHPKSGRYIA VWLPPNFTGD ARESFFANVD IIDDISPFWY TTDASGRLYG QRDDDLVRIA HENNIRIIPS IHNVGNPGAV VPVLTNPQLR ARHIQNIVDE VLARGYDGID IDYESLDPSL RDDFTAFIID LAAALHAHNK LLTVAVHAKD RDDGGLGAFQ DWRAIGPHVD QLRIMTYDYH WRGSGPGPVA PAYWIEAVAN YAREVVDPAK VLIGVHFYGY DWPPNGNATA RPWRVIEEII NEYQPTVSFI ERNARGRVGE STFTYRTSAG TRTVWFMTDT GLADKITTVQ KLDLAGIAIW QLGYERPEYW QTVRTNLVQD STLIQRALNT LLPDP
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