Gene Cagg_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1387 
Symbol 
ID7267239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1712613 
End bp1713320 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content55% 
IMG OID643566230 
Productpeptidase membrane zinc metallopeptidase putative 
Protein accessionYP_002462730 
Protein GI219848297 
COG category[R] General function prediction only 
COG ID[COG2738] Predicted Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTCT TCTTCGATCC ACTGTATCTC GTCTTTGCGG TACCGGCGAT GCTTTTCGCG 
CTGTGGGCCC AGTTTCAGGT CCAGTCAGCG TTTCATAAAT GGTCCCGTGT TCCGAATATG
CGGCGTCTGA ACGGTTTTGA TGTCGCCCGC ATCTTGATTC GGAATGAGGG CTTAGAGCAT
GTCGGGGTTG AGACCATTCC CGGAATGCTT ACCGATCACT ACGATCCATC GAGCAAAGTG
ATCCGTCTTT CGGAAGGATC GGTGCAACCA TCGGTAGCGG CGATGGCAAT TGTTGCCCAC
GAGTTGGGCC ATGCCGCTCA AGATAAGGCG GGATACGTAT GGTTACGGGT CCGGTCAGGG
ATTGTTGGCT TTGCGAACAT CGGCTCGCAA CTGGGGACGT GGCTATTCTT TATCGGTATG
CTGCTCGGTG CCGGTGGTGG GAGCCGCTTC GGTTTTCAAT TGGCAGTTTT GGGTGTGGTC
TTGTTCAGCG CTGCGGTAGC ATTTACCCTG GTGACGTTAC CGGTGGAGTT TAATGCCAGT
GCGCGCGCCC GTGAAATGCT GCAACGTAAC GGTCTGGTCA CGGTACAAGA GGCCGAGGGC
GTGAACGCAG TCCTGAATGC CGCCGCGTTG ACGTATGTGG CTGCTGCGGC CCAAGCCATT
GCCCAGTTGC TCTACTTTGT CACGATTTTA ATGCGACGGA GGGACTAA
 
Protein sequence
MPFFFDPLYL VFAVPAMLFA LWAQFQVQSA FHKWSRVPNM RRLNGFDVAR ILIRNEGLEH 
VGVETIPGML TDHYDPSSKV IRLSEGSVQP SVAAMAIVAH ELGHAAQDKA GYVWLRVRSG
IVGFANIGSQ LGTWLFFIGM LLGAGGGSRF GFQLAVLGVV LFSAAVAFTL VTLPVEFNAS
ARAREMLQRN GLVTVQEAEG VNAVLNAAAL TYVAAAAQAI AQLLYFVTIL MRRRD