Gene Cagg_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1374 
Symbol 
ID7268666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1699397 
End bp1701013 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content49% 
IMG OID643566217 
Productprotein of unknown function DUF87 
Protein accessionYP_002462717 
Protein GI219848284 
COG category[R] General function prediction only 
COG ID[COG0433] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.627609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGATA GCACAATACT GGCCCTGACA GACGATGCAC TCATCGGAGA AACTTCTTCA 
TCGGAGTTTT CGTCCGAGGG GGGAACTCCT ACTTTTGACC GAATTCCATT TCGCGTCAGA
GCAGGAAAAT GCCCTAATCT TAATACTTTT GTGATAGCCC TCCGACAAGG GGATGACAAC
AGAGCACACT ATGGCAGGAT TATTGCCGGC AGTGAACTGA ACCTGCGGGC CAGCCCTACA
GGGATGCAAA AGGATGATGC CTATGGTATG CGACGTACCG ATATTCGTTC ATCAGAGCTG
TCACCCGATC TGGTGAGAGT AATGGAGATT GAGCTTCTTG GAGAAATTAG CGTATTGGGT
AACGGCTCTT TGGAAATCAC CGAACCGACC CAGCTTCCTC ACACCGGGCA ACCTGTGTAC
GAATTGCCCG CTACAATTAT CCCGAAACTT CTCAACATTC CCGAAGATGA GAGGGTACAA
GATAAAGATA AACCAACCAG TGCTTCAGGC CTTTATCTGG GAAACATCGA ATCAGGGGGG
CACAGCATAC CGTTCTTTTT ACCGAATCGT GCCATTGCCC GTCATATTGC CGTACTAGGG
AAAACCGGCG TTGGAAAGAG TTATGCCGTC GGCGTCTTGA TGGAGGAACT CTACGCAAAA
CGTATCCCGA TACTCTCGTT TGATGTCTTG GGAGATACCG AACAAACGGC AAGGGAACTT
GAAGGAAAAC ATATCGTTGC CGGGACCGAC GATTTCAAAA TCCCCTACTC TATCATAGGT
CTTGAGGAGT TTCTGGCGTT CATTCCGAAC CTAACAAGCG ATCAGCGAGA ATTGATAACA
TCGGCTTATG GCAATGTCTT TGATGAGGCG CTCGATAAAC TTGAGAAGGG GGAGGAATTA
AATATTCCCT TCAGTCGTCT TACATCTCTT GTTGAAGACA TCGGCCGATC TATCAATTCC
AAAGCAACTC CGAATGCAGT CAAGCGGGTC GAAGCAGCCT TCAACCGAAG TTCTCTCCTA
ACCGACAAAC CGGTTACATG GACAAACCTT TTGGAAACCT CACCACTTAT TAACATCTAT
GTAGGCCATT TAGGCCAATG GCAACGCAAT CTTGTTGTAG GCGCAGTAGC CCGTATTCTC
CAGCGATTAA GGCGTCGCAA TCATATACCA CCGTTCGTTT TGGTTATTGA TGAAGCGCAT
CTGTTCTTGC CCGGCGGGAG TGACCTCCCA CCCTCGACAT TGGTTCTTCG AGAGATGATC
CGCACGGCTC GGCATGACTC GGTGGGGGTG GTATTGTTGA GCCAAAGTCC TTCTTCGATG
GATCGCCAGA TTCTGCTCAC CTGCAATACA CGTATGCTCT TTGCTTTGGA TCCTGAAGAT
TTACGGGTAG TTGCCGGGCA AATCGGCGAT CTGCCGGAGG AGACGATAAA GCGTATTCCG
AGAATGGCCC GTGGCACGGC GGTATTCACA TCCGGTATGG ACATCATGCG TCATGCGGTC
ATCGTTAAAA TACGCGAAAG AACCTTTACG ACCCATGTAG CCGAAACTCC CGATTTACGT
GAGGCGGTTG AACAATGGCA CAGAGAACAT CAGAAACAGC AAAACAGCAG CAGATAA
 
Protein sequence
MSDSTILALT DDALIGETSS SEFSSEGGTP TFDRIPFRVR AGKCPNLNTF VIALRQGDDN 
RAHYGRIIAG SELNLRASPT GMQKDDAYGM RRTDIRSSEL SPDLVRVMEI ELLGEISVLG
NGSLEITEPT QLPHTGQPVY ELPATIIPKL LNIPEDERVQ DKDKPTSASG LYLGNIESGG
HSIPFFLPNR AIARHIAVLG KTGVGKSYAV GVLMEELYAK RIPILSFDVL GDTEQTAREL
EGKHIVAGTD DFKIPYSIIG LEEFLAFIPN LTSDQRELIT SAYGNVFDEA LDKLEKGEEL
NIPFSRLTSL VEDIGRSINS KATPNAVKRV EAAFNRSSLL TDKPVTWTNL LETSPLINIY
VGHLGQWQRN LVVGAVARIL QRLRRRNHIP PFVLVIDEAH LFLPGGSDLP PSTLVLREMI
RTARHDSVGV VLLSQSPSSM DRQILLTCNT RMLFALDPED LRVVAGQIGD LPEETIKRIP
RMARGTAVFT SGMDIMRHAV IVKIRERTFT THVAETPDLR EAVEQWHREH QKQQNSSR