| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1368 |
|---|
| Symbol | |
|---|
| ID | 7268660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 1692089 |
|---|
| End bp | 1693246 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643566211 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002462711 |
|---|
| Protein GI | 219848278 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.101155 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCGC AATTGCACGT TGACTTTCGG CGTCAACTAG GACATCTAAC ACTGCGCATG
CAATTGCAGG TTGGGCCTGA GATTTTGGTA TTGTTTGGGC CTTCCGGGGC CGGTAAGACG
CAGACACTCC AGGCGATTGC CGGCCTGATG ACACCCGATG AAGGGTTGAT CAAACTCAAC
GAGACAATCC TGTTTCGTCG TCGGCCCGGT GAGCGGATGA TCAATCTGCC ACCGCGTCAC
CGGCGGATCG GCTACGTCTT TCAACAGTAC GCTCTCTTCC CTCATATGAC GGCCCTAGAG
AATGTGGCGT TTCCGCTTGG TCGAAGCAAT GATGCCCGTC AGCATGCACT CGCGCTGCTT
GAGAAGATGC ATTTGGCACA TGTCGCTCAT CGTAAGCCGC ACGAATTGTC GGGGGGGCAA
CAACAGCGGG TGGCAATTGC CCGTGCATTG GCGACCAACT CACCGGTGAT CCTGTTCGAT
GAGTCGTTTT CGGCGCTCGA CCAGCCGGTG CGTGATCGGT TACACGCCGA TTTGCGCGCC
TTGCAAGCCG AACGTGGTTT GATCGTGATC TACGTGACCC ATAATCTCAA CGATGCCTTT
GCTGTCGGTC ATCGTGTGGC GATTGTCACC GAGGGGCATG TCGAGCAGGT GGGACCATTG
ACGGAGGTGT ATCGCTATCC GGTAAGTGTA CAGGTGGCCC GGATTCTAGG TATCAGGAAC
CTGATGCAGG TACAGGTGAT AGGGCAAGAG ACCGATCGGG TTTGGCTTGA TTGGCAGGGA
TGGCGCATCG AAGCGAGTAG TCTGGCGCAA TCGGTTGCAG TCGGTCAGAT GGTGCATGCC
TTTATTAATC CGGTCGAGAT ACGGTTGGTC TATCCTGATC GACCATCCCA TCGCTTTACC
GGTTGCAATC TGTTGCCGGC GAGAATTGTC GGCCGGCATG CCGATCGATA TTTGCATCAA
CTGATCATTG CGGTCGGGTC ATCTACGCTT GAGGTAGCTT ATCCATACAC GGCATATGCC
GGTCTTGATA CGAATGTCGG GAGTGAAGTA CAGATTAGTT TTCGTCCCGA AAGTGTTGTC
ATCATTCCAG AACGTAGTAC GACTCAGATA GCTTCGTCTG AGACGGTCGG ATTAGCGACG
GTTGCTCACC GGTTATGA
|
|---|
| Protein sequence | MQPQLHVDFR RQLGHLTLRM QLQVGPEILV LFGPSGAGKT QTLQAIAGLM TPDEGLIKLN
ETILFRRRPG ERMINLPPRH RRIGYVFQQY ALFPHMTALE NVAFPLGRSN DARQHALALL
EKMHLAHVAH RKPHELSGGQ QQRVAIARAL ATNSPVILFD ESFSALDQPV RDRLHADLRA
LQAERGLIVI YVTHNLNDAF AVGHRVAIVT EGHVEQVGPL TEVYRYPVSV QVARILGIRN
LMQVQVIGQE TDRVWLDWQG WRIEASSLAQ SVAVGQMVHA FINPVEIRLV YPDRPSHRFT
GCNLLPARIV GRHADRYLHQ LIIAVGSSTL EVAYPYTAYA GLDTNVGSEV QISFRPESVV
IIPERSTTQI ASSETVGLAT VAHRL
|
|---|
| |