| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1357 |
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| Symbol | |
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| ID | 7268649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 1681735 |
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| End bp | 1682748 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643566200 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_002462700 |
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| Protein GI | 219848267 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000335241 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000522042 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAACGC TCGAATTATC GTTGATAACA CCACGAGTTA CCCTCCTTGC TGCGGCTGAA
AATTATGGCC GTTTTGCCAT TGCACCGCTC CAGCGTGGTC ATGGCACTTC GTTGGGGAAT
GCACTGCGTC GTGTGTTGCT CTCATCGATT CCCGGTGCAG CCGTGACCCG GATCAAAATT
ACCGGAGTTA TTCATGAATT TACGGCAATC CCCGGCGTTG TCGAAGATGG TACGCAGTTG
GTGCTGAACG TTAAAGGCAT TCGCTTACGT TCGTACAGTG ATCGGGCAGT TGCATTGCAA
TTGGTCAAGC AAGGTCCCGG TCCGGTTTTT GCCGGCGATA TTGATGCTCC CAGTACGGTT
GAGATTGTTA ATCCGCAACA TTACCTCTGC ACTATCGATG ACGAACACAC GACACTCGAA
ATGCAACTGA CCGTCGAACG TGGACGTGGG GTTCAGTTGG CCGATACGGT GAGCGGAATG
CCAATTGGCG AGATTGCTGT TGATGCGCTC TTTAGCCCTA TTCCGCGGGT GAACTTTTTG
GTCGAGGAGA TAGGCGGTGA TCCACTCACC GGGTATGATC GTTTGATCAT TGAAATTTGG
ACGGATGGAA CGATTAAGCC CGGTGATGCG CTGAGCCATG CTGCCCAGAT CCTGACTCAA
TACTTTAGCC GGATCGTCAG TCTGAACCAG CCAGAGGAAT CAGAACAGCA ACCTACGCTA
CCGCCACCGA TCCCCGACGA AATCGCCAAC CGCACAATTG ACGAGCTTGG CTTGAGTACG
CGCACCTACA ATAGTTTGCG CCGAGCAGAT ATTCAAACGA TTGGTCAGTT GCTGCGTCTT
GATGATCGTG GCTTGATGAG TATTCGTAAT TTGGGGGCCA AGGGAATTGA AGAGATTCAC
CAGCGTCTGG CAGCGCTTGG GTATCGTTCT GGTGAAACTA CGTCTGGCCA TTTACCTGAT
ACGACCAATC AGAATGTGCC GTCAACTCAT GATTCCTACC CAGAGGAGAA GTGA
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| Protein sequence | METLELSLIT PRVTLLAAAE NYGRFAIAPL QRGHGTSLGN ALRRVLLSSI PGAAVTRIKI
TGVIHEFTAI PGVVEDGTQL VLNVKGIRLR SYSDRAVALQ LVKQGPGPVF AGDIDAPSTV
EIVNPQHYLC TIDDEHTTLE MQLTVERGRG VQLADTVSGM PIGEIAVDAL FSPIPRVNFL
VEEIGGDPLT GYDRLIIEIW TDGTIKPGDA LSHAAQILTQ YFSRIVSLNQ PEESEQQPTL
PPPIPDEIAN RTIDELGLST RTYNSLRRAD IQTIGQLLRL DDRGLMSIRN LGAKGIEEIH
QRLAALGYRS GETTSGHLPD TTNQNVPSTH DSYPEEK
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