Gene Cagg_1352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1352 
Symbol 
ID7268644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1676959 
End bp1677501 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content54% 
IMG OID643566195 
Productthioesterase superfamily protein 
Protein accessionYP_002462695 
Protein GI219848262 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0082018 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000391158 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAGCTA ACGGCGGAAC TCAACAAACC GAGCAGTTTC GTACTCTGCA AATGACGGTC 
TTGATGACCC CTGATATGGC GAACTTCGCC GGTAATGTTC ACGGTGGTCA TATTTTGAAA
CTGCTCGATC AAGTTGCCTA TGCTTGTGCA TCGCGCTATT CGGGGCGTTA TGTTGTTACC
GTCTCGGTCG ACCAGGTCAT CTTCCGGGCT CGTATTCACG TGGGCGAGTT GGTGACGTTT
CTGGCATCGA TCAACTATAC CGGTACGACC TCGATGGAGG TTGGCATTCG AGTAGTGGCC
GAAAATATTA CGGCGCGCAC GCAGCGGCAT GTCATGACCT GCTATTTTAC GATGGTTGCT
GTGGATGAAG AGTTTCGTCC GTGCCCTGTA CCACCGGTGC GGATCGAGAC GGCCGAGCAG
CGTCGGCGGT GGATGGCAGC GCGTTTGCGC CGCGAATTAC GCCGTGAGAT CGAGCAGCGG
AGTCTTGAGA TTCGTCAGCA TCCCGAAGAT TTTTTGAACG AGCTGGATAG TGAGCCGCAT
TAG
 
Protein sequence
MEANGGTQQT EQFRTLQMTV LMTPDMANFA GNVHGGHILK LLDQVAYACA SRYSGRYVVT 
VSVDQVIFRA RIHVGELVTF LASINYTGTT SMEVGIRVVA ENITARTQRH VMTCYFTMVA
VDEEFRPCPV PPVRIETAEQ RRRWMAARLR RELRREIEQR SLEIRQHPED FLNELDSEPH