| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1348 |
|---|
| Symbol | |
|---|
| ID | 7268640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 1670621 |
|---|
| End bp | 1672762 |
|---|
| Gene Length | 2142 bp |
|---|
| Protein Length | 713 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643566191 |
|---|
| Product | methylmalonyl-CoA mutase, large subunit |
|---|
| Protein accession | YP_002462691 |
|---|
| Protein GI | 219848258 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
|---|
| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain
[TIGR00642] methylmalonyl-CoA mutase, heterodimeric type, beta chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000457861 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000004793 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCCAG AGACGCAGGA GACGGTACAG CGCACTCCAC TGTTCGACAT GTTCGCTCCC
GCGACGTATG AGGAGTGGCG AGCAGCAGCG GAGAAGACGC TGAAAGGTGC GCCTTTCGAG
AAGCGTTTGA TTACGAAGAC CTACGAGCAG ATTCTGCTGC AACCGATTTA TAATGCCGGT
GATATTGCCG ATCTACCGCA TATCAACTCA TTGCCCGGTT TTGCCCCTTT TGTACGAGAT
ACTCGCATTC TCGGGCCGTT GGTCGAACGC TGGCAGGTAG CGCAAGAACT GCCTTACCCA
ACGACAACTG AAGTTCGTCA AGCGCTCCAA GCCGATCTGC CGCGTGGGCT GACGGCGCTG
AATCTGCCGC TTGATCAAGC GACCCGCCTT GGGATCGACC CCGATTCAGC CGCACCAACA
CAAGTCGGGA TGGGGGGCGT ATCGTTGGCA ACGCTTGACG ATGCCCGCCG CTTGCTCACC
GATCTCGATC TCAGCCGGTT GTCGCTTGCG ATCAACACCG GCGCACAAGC CATGCCGGTG
GCAACCCTCT TGCTGATTGC CGCCGAGGAG CAGGGTCTCA ATCCTTCCCA ACTACACGGC
TGGCTCGGTG CCGATCCTTT AGGGGCGTTG GCTGCCGATG GCTCGCTGCC GGGTTCATTG
GATCGCTGCT ACGATTTACT GGCCGAATGG ACGAGATGGG CTATAGCATA CGCCCCACAC
GTGCGAACTA TCGTTGTTTC TTCTCATGTC TACCACAACA GTGGTGCGCA CGCCGTCCAA
GAACTGGGCT GCGCACTGGC AACCGGTGTA GCCTACCTCC GCGCAATGCA AGAGCGCGGC
CTGAGTGTGA ATGAAGTTGC TCCCCGTATC CAGTTTACCT GTTCGGTCGG GTCGCAATTC
TTCCTCGAAG TGGCCCGGCT CCGCGCTGCC CGTATGTTGT GGGCACGCAT TGTGTCGGCG
TTCGACGGTG ATGATACCGC CCAACGCATG CATCTCCACG TCCGCACCTC AGCGTGGACG
AAGACGCGCT ACGATGTCTA TAACAATATG CTGCGCGCAA CCGGTGAGGC GATGGCAGCA
GTCATGGGTG GCGCGCAGAG TATTCATATC AGCCATTTTG ATGAGGCGTG GGGCTTACCC
GACGAGTTCT CGCGCCGGAT CGCGCGTAAT CTGCATATCA TTCTGCAAGA GGAATGCAAC
TTTTTCCGTC TAATCGATCC GCCCGGCGGT TCGTGGGCCG TCGAGAAACT GACCGATGAG
ATAGCTGCGA AGGCATGGGA GTTCTTCCAG GCGATTGAGC GGCAAGGTGG TATGGCGGCG
GCCTTGCAAG CTGGGATGCC GCAAGCAGCA ATTGCCGCCA CTCGCGCTGA GCGCTTCGAT
GCCATTGCTC ATCGCCGCGA GGTCATCGTG GGCGTCAATA TGTATCCCAA TCTGAACGAG
AAGCTCCCCG AGGTACGCCA GATCGATCAC GTACAACTGC ACACCGCCCG TGCCGTTGAT
CTGCGCCATG CTCGCGAAAC ACGCGCCGAC GACGTCTGCC AGTCGGCCTT GATCGAACTC
GCCCAGCAAC GCACGATGAC TGCGGCCCTG GCGGCTGGCC GTGCCGGTGC CACACTTGGC
GAAATGAGCT GCGCGTTGGT TGCTGCCGAT AGCGCTGCAC CACAAGTAAC ACCGTTGCCT
GCCCACCGCG CCGCTGAGCA GTTCGAGGCG CTGCGGGCTA CAGCCGATGC GTACACCGCC
CGCACCGGTC GCCGACCGAG TGTTTTCCTT GCCAATATGG GGCCGATTAG CCAACACAAA
GCCCGTGCCG ATTTCGCCAC CAACTTTTTT GCTGCCGGTG GATTCGCCGT GATCGGTAAC
GACGGCTTCG CGACTGTCGA GGAAGCGGCC GCAGCAGCTC TTGCTGCCAA TGCCGAGATC
GTGACGATCT GTTCGACCGA TGAAACGTAC CCTGATATTG TTCCGGCCTT GACCCACGCC
ATCAAATCGC AACGACCTGA GACAACGGTC GTGCTGGCCG GATATCCGAC CGATTTTATC
GATATGTACC GCGCTGCCGG GATCGATGAG TTTATTCATC TGCGCGCCAA CTGCTATGAA
ACATTGGCCC GGCTGCAACG CTTGAAAGGA GTAGCCGATT GA
|
|---|
| Protein sequence | MAPETQETVQ RTPLFDMFAP ATYEEWRAAA EKTLKGAPFE KRLITKTYEQ ILLQPIYNAG
DIADLPHINS LPGFAPFVRD TRILGPLVER WQVAQELPYP TTTEVRQALQ ADLPRGLTAL
NLPLDQATRL GIDPDSAAPT QVGMGGVSLA TLDDARRLLT DLDLSRLSLA INTGAQAMPV
ATLLLIAAEE QGLNPSQLHG WLGADPLGAL AADGSLPGSL DRCYDLLAEW TRWAIAYAPH
VRTIVVSSHV YHNSGAHAVQ ELGCALATGV AYLRAMQERG LSVNEVAPRI QFTCSVGSQF
FLEVARLRAA RMLWARIVSA FDGDDTAQRM HLHVRTSAWT KTRYDVYNNM LRATGEAMAA
VMGGAQSIHI SHFDEAWGLP DEFSRRIARN LHIILQEECN FFRLIDPPGG SWAVEKLTDE
IAAKAWEFFQ AIERQGGMAA ALQAGMPQAA IAATRAERFD AIAHRREVIV GVNMYPNLNE
KLPEVRQIDH VQLHTARAVD LRHARETRAD DVCQSALIEL AQQRTMTAAL AAGRAGATLG
EMSCALVAAD SAAPQVTPLP AHRAAEQFEA LRATADAYTA RTGRRPSVFL ANMGPISQHK
ARADFATNFF AAGGFAVIGN DGFATVEEAA AAALAANAEI VTICSTDETY PDIVPALTHA
IKSQRPETTV VLAGYPTDFI DMYRAAGIDE FIHLRANCYE TLARLQRLKG VAD
|
|---|
| |