| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1338 |
|---|
| Symbol | |
|---|
| ID | 7268629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 1657696 |
|---|
| End bp | 1659135 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643566180 |
|---|
| Product | aminotransferase class-III |
|---|
| Protein accession | YP_002462681 |
|---|
| Protein GI | 219848248 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000660385 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACCT TGACGAACAA TCGGTTACAA GCCCTCAGCG ACAATGTGTG GTTACACTTC
TTCCAAATGG GCCATTTCTC CAGTACCGGC GCGCGACCCA CTGTGCTCGT GCGTGGTGAA
GGGTCGCGCG TGTGGGATCA AGACGGTCAC GAGTATATTG ATGGTTTGTC CGGTCTTTTC
ACAGTCAATG TCGGTTATGG TCGCCGCGAA ATCATTGAGG CGATCGGTGC GCAACTGAGC
GAGATTGCAT ACGTTAGCCC CTTTAGTTTC CCCAGCATCC CCCAAATCGA TCTATCGGCA
CGGCTAGCCG CTATTAGTCC GACCGGCCCT CGCTCACGGG TCTTCTTGAC CACCGGTGGC
TCAGATGCGG TTGAAACTGC CCTGAAGCTG GCAAAAGCCT ATCAACGCCG CCGTGGATTT
GCCGACCGTA CCAAGATCAT TGCCCGCCGG ATTAGTTATC ACGGTACCTC GATGGGTGCC
CTGTCGGTTA ATGGTGTAAC CTCGATCCGC AACGGGTTCG GCCCACTGGT TCCGGGAGCG
CGCCACGTAC CGCTCCCCTA TCGCTACCGC TGCGATTACT GTGCTTTACA CAGTGGCTGC
CGTGGCGTCT GCGCTGATGA GGTGGAACGC CTGATTGAGT TTGAAGGGCC GGAGACAATT
GCCGCCATCA TCATGGAACC GGTCCAGAAT AGCGGCGGTG CGATCGTCTC GCCGCCCGGC
TACCTCCAAC GTATCCGCCA AATCTGCGAT CACTACGGCA TTGTTATGAT TGTCGATGAA
GTCATCTGCG GTTTTGGGCG GGTAGGTGAC TGGTTCGGTT CCACGGCGAT GGAGGTTCAC
CCCGACATCA TTACCTGCGC CAAAGGGATT ACCAGTGGCT ATGCACCGCT CGGTGCGACA
ATTGTGCGTG ACACCATTGC CGATATGTTT GTTTCCGAGA ATGACGCCGA CAAGTTCATG
CACGGTATTA CCTTCGGTGG ACACGTAGCG AGTTGCGCTG CCGCGCTCGC AAATCTCGAC
ATTATCGAAC GTGAACACCT GCTTGAGCGC AGCCGTGAGA TGGGGGCGTA CCTCATGCGT
GAACTAGAGG CGGCGATTGG CCAGCACCCC AACGTCGGCG AGGTGCGCGG GATGGGCATG
TTTATGGCGG TTGAGCTGGT GCGTGACCGT ACCACCCGCG AGTCTATCGC CGAAGAGCGG
TTGATGAGCT GGTTGAGCGA TCAGTTGAAG CAACGCGGGT TGATCTGTCG GGCTGATGAT
CGACTCGAAC CGGTGATCCA ACTGGCGCCA CCGTTGATCC TCACCCGCGA AGAGGCCGAT
CGCTGCGTGC GCATCGTCAC GGAAGCGGTG CATGCACTGG GACGCAAGTT GGGCAGCACG
CCAGCGGTAT TTGCGATCAA TCCGCCAACG GAAACGAAAA CCGCCGTGGC CGCGGATTAA
|
|---|
| Protein sequence | MSTLTNNRLQ ALSDNVWLHF FQMGHFSSTG ARPTVLVRGE GSRVWDQDGH EYIDGLSGLF
TVNVGYGRRE IIEAIGAQLS EIAYVSPFSF PSIPQIDLSA RLAAISPTGP RSRVFLTTGG
SDAVETALKL AKAYQRRRGF ADRTKIIARR ISYHGTSMGA LSVNGVTSIR NGFGPLVPGA
RHVPLPYRYR CDYCALHSGC RGVCADEVER LIEFEGPETI AAIIMEPVQN SGGAIVSPPG
YLQRIRQICD HYGIVMIVDE VICGFGRVGD WFGSTAMEVH PDIITCAKGI TSGYAPLGAT
IVRDTIADMF VSENDADKFM HGITFGGHVA SCAAALANLD IIEREHLLER SREMGAYLMR
ELEAAIGQHP NVGEVRGMGM FMAVELVRDR TTRESIAEER LMSWLSDQLK QRGLICRADD
RLEPVIQLAP PLILTREEAD RCVRIVTEAV HALGRKLGST PAVFAINPPT ETKTAVAAD
|
|---|
| |