Gene Cagg_1337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1337 
Symbol 
ID7268628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1656659 
End bp1657363 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content58% 
IMG OID643566179 
ProductLmbE family protein 
Protein accessionYP_002462680 
Protein GI219848247 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000443128 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACGTCC AACCCGAACC CATCGTAGTG ATAGCCGCTC ACGCCGACGA TATAGAGTTC 
GCCGCTGCCG GCACGATTGC CGGTTGGGCA GCAGCCGGGC ATCCGATCAC CTATTGCATC
GTTACCGACG GATCGGCAGG GTCAAACGAA CCGGGAGCCG ATCTCACGGC ATTAGTCCAA
CGTCGGCAGG AAGAACAGCG GGCCGCCGCT GCTGTTTTGG GTGTGCATGA TGTGCGCTTT
CTTGGCTATC GTGATGGCGT GTTACAACCC ACCCTCGAAT TACGACGCGA ACTGACGCGC
CTTATCCGTG AGGTACGTCC ATTCCGTGTC CTCTGCCAGG ACCCAACGCT GGTCTTTGCC
GGCAAGAGCT ACATCAATCA TCCTGACCAT CGTGCTGCTG GCGAAGCAGC GATCTATGCC
GTCTTTCCCA GCGCCGAAAC GCGCCCCATC TTTCCAGAAC TGCTCGCCGA AGGCTACGAG
CCGCACAAAG TGCGCGAACT CTACCTGATG TTCCCACCAA CACCCGATCT TTACCTCGAC
ATTAGCGACC GGATCGAGCA AAAGATCGAG AGTCTGCTCT GTCATCGATC GCAACTCGGC
CCCGAAGTCG TCGATTGGGT GCGCAAGTGG GATGCCGAAA ACGGCGCGCA GATTGGCGTT
GCCTACGCCG AAGCCTTCCG GGTGCTGCGT CTCGTCGATA ATTAA
 
Protein sequence
MHVQPEPIVV IAAHADDIEF AAAGTIAGWA AAGHPITYCI VTDGSAGSNE PGADLTALVQ 
RRQEEQRAAA AVLGVHDVRF LGYRDGVLQP TLELRRELTR LIREVRPFRV LCQDPTLVFA
GKSYINHPDH RAAGEAAIYA VFPSAETRPI FPELLAEGYE PHKVRELYLM FPPTPDLYLD
ISDRIEQKIE SLLCHRSQLG PEVVDWVRKW DAENGAQIGV AYAEAFRVLR LVDN