Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1337 |
Symbol | |
ID | 7268628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 1656659 |
End bp | 1657363 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643566179 |
Product | LmbE family protein |
Protein accession | YP_002462680 |
Protein GI | 219848247 |
COG category | [S] Function unknown |
COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000443128 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCACGTCC AACCCGAACC CATCGTAGTG ATAGCCGCTC ACGCCGACGA TATAGAGTTC GCCGCTGCCG GCACGATTGC CGGTTGGGCA GCAGCCGGGC ATCCGATCAC CTATTGCATC GTTACCGACG GATCGGCAGG GTCAAACGAA CCGGGAGCCG ATCTCACGGC ATTAGTCCAA CGTCGGCAGG AAGAACAGCG GGCCGCCGCT GCTGTTTTGG GTGTGCATGA TGTGCGCTTT CTTGGCTATC GTGATGGCGT GTTACAACCC ACCCTCGAAT TACGACGCGA ACTGACGCGC CTTATCCGTG AGGTACGTCC ATTCCGTGTC CTCTGCCAGG ACCCAACGCT GGTCTTTGCC GGCAAGAGCT ACATCAATCA TCCTGACCAT CGTGCTGCTG GCGAAGCAGC GATCTATGCC GTCTTTCCCA GCGCCGAAAC GCGCCCCATC TTTCCAGAAC TGCTCGCCGA AGGCTACGAG CCGCACAAAG TGCGCGAACT CTACCTGATG TTCCCACCAA CACCCGATCT TTACCTCGAC ATTAGCGACC GGATCGAGCA AAAGATCGAG AGTCTGCTCT GTCATCGATC GCAACTCGGC CCCGAAGTCG TCGATTGGGT GCGCAAGTGG GATGCCGAAA ACGGCGCGCA GATTGGCGTT GCCTACGCCG AAGCCTTCCG GGTGCTGCGT CTCGTCGATA ATTAA
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Protein sequence | MHVQPEPIVV IAAHADDIEF AAAGTIAGWA AAGHPITYCI VTDGSAGSNE PGADLTALVQ RRQEEQRAAA AVLGVHDVRF LGYRDGVLQP TLELRRELTR LIREVRPFRV LCQDPTLVFA GKSYINHPDH RAAGEAAIYA VFPSAETRPI FPELLAEGYE PHKVRELYLM FPPTPDLYLD ISDRIEQKIE SLLCHRSQLG PEVVDWVRKW DAENGAQIGV AYAEAFRVLR LVDN
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