Gene Cagg_1303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1303 
Symbol 
ID7268594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1602346 
End bp1603293 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content55% 
IMG OID643566146 
Productpyruvate carboxyltransferase 
Protein accessionYP_002462647 
Protein GI219848214 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.254964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0013896 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGTGA TGGAAAGTGC CCCACTACCG ACGTTCGTGC ATATTCGTGA AGTTGGCCCG 
CGCGATGGTC TGCAAAATGA ACCGGTGATT CTCAGTACCG CCCAGAAGGT GAAGTTGATC
GATATGCTGT CGGCAACCGG CCTACAGGCG ATTGAAGTCG GGGCGTTTGT GCGACCGCAG
CAGGTACCAC AGATGGCCGA TACCGAAGCG GTATTTGCCG GTATTAAGCG TCATCCGGGC
ATCACCTATA GTGCGATTGC GCCAAACGTG ATTGGTGCGC GACGCGCATT GGCTGCCGGT
GCTGATGTGG TGCAGGTCTT TCTCAGCGCA AGTGAGAGTC ACAACCGTAG TAATGTGAAC
ATGAGCATCG AGCAGTCGTT GACGCAGGTG GCAGAAATGG CGGCACTGGT ACACGGAGCG
GGAAAACCGT TCGATGCAGT AGTATCGGTG GCGTTCGGGT GTCCGTTTGA AGGTGATGTT
CCGGTCGAGC GTGTGCTCGA TATTTGTCAA CGCTTGCTTG ATGTCGGTGC CGAGCAACTG
ACGTTAGGCG ATACGACCGG TATGGCGCAT CCATTGCTCG TGCAAGAAGT GGTGCGCGCG
TTTCGCGCAC GCTTCCCGCG TCAGCCGTTA CGGTTGCATC TGCACAGCGC ACGTGGTGCA
GGGTTGGCGA ATCTGCTGGC CGGCTTGCAG ATGGGAGTCG ATCTCTTTGA TTCGAGTATT
GGTGGTATCG GTGGTTGTCC GTTTGCCCCC GGTGCTCCCG GAAATCTCTG TACCGAAGAT
GTCGTACATT TGCTGCATGA AATGGGTATT AAAACCGGAT TAAATCTGCC AGCATTGATG
AACACGGCCC GTGAGTTAGA GCGGATGTTA GGTCACGAGG TGCCCGGTCA AACAATCAAA
GCAGGTATCT GCAAACACCT GCGTGATCGT GAATCATCCC CGCGGTAG
 
Protein sequence
MTVMESAPLP TFVHIREVGP RDGLQNEPVI LSTAQKVKLI DMLSATGLQA IEVGAFVRPQ 
QVPQMADTEA VFAGIKRHPG ITYSAIAPNV IGARRALAAG ADVVQVFLSA SESHNRSNVN
MSIEQSLTQV AEMAALVHGA GKPFDAVVSV AFGCPFEGDV PVERVLDICQ RLLDVGAEQL
TLGDTTGMAH PLLVQEVVRA FRARFPRQPL RLHLHSARGA GLANLLAGLQ MGVDLFDSSI
GGIGGCPFAP GAPGNLCTED VVHLLHEMGI KTGLNLPALM NTARELERML GHEVPGQTIK
AGICKHLRDR ESSPR