Gene Cagg_1294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1294 
Symbol 
ID7266280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1593573 
End bp1594481 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content59% 
IMG OID643566136 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_002462638 
Protein GI219848205 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0408] Coproporphyrinogen III oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.770302 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTA CCGACACTCG TTCGCTTGTG CATGAGCTGA TGCGCACCGG TCAGCAAAAC 
CTCTGCGCTG CCTTTGAAGA GATCGACGGA CACCAACGTT TTGTCGCCGA GACGTGGGAA
CGACCGGGAG GAGGTGGCGG TACGGCGCGC GTCATGACCG ACGGTGCCGT CTTCGAGCGC
GCCGGGGTCA ACGTGTCGGC AGTGTATGGC GAAGAGGTGC CACCGAGTAT CTGGCAACAT
CGCCCCTCAA CCCGCGGCCA ACCCTACTTC GCCACCGGTA TCTCGATGGT TCTTCACCCA
CGCAACCCTT ACGTTCCCGC CTTTCACGCC AACTTTCGCT ACTTCGAGGC CGGTGACGAC
TGGTGGTTCG GTGGTGGGAT GGATCTCACT CCTAACTACG GATTTGCCGA AGATGCACGC
CATTTTCACG TCACGCTTCG CGACTACTGC GGACGCCACT CCATCGCCGA TTATCGCACG
ATGAAAGAGA CCTGTGATCG CTATTTTTTT CTCAAGCACC GTAATGAAAT GCGCGGCATC
GGCGGCATCT TCTTCGACGA TCTCCACCCA GACGGGCCAG ACGGCTTCGA TCGCGCGTTT
GCGTTCGTCA GCGATGGCAT CACCACTATT CTCGACGCCT ACCTGCCGAT CGTGCGCCGG
CGCATGCACA CCCCTTACGG CGAACGCGAA CGTTCGTGGC AGCTCTACCG ACGGGGTCGG
TATGTTGAAT TCAACCTCAT CTACGACCGG GGGACGCTCT TTGGCCTACA GACCGGCGGC
AACATTGAAG CCATCTTGAT GTCATTACCG CCACTAGCGC GCTGGCAATT CAAATATCAG
CCCGAACCAG GATCACCGGA AGCGGCGATG GCCGAGTTTC TCAAACCGCG TGACTGGGCA
GAGGAATGA
 
Protein sequence
MTITDTRSLV HELMRTGQQN LCAAFEEIDG HQRFVAETWE RPGGGGGTAR VMTDGAVFER 
AGVNVSAVYG EEVPPSIWQH RPSTRGQPYF ATGISMVLHP RNPYVPAFHA NFRYFEAGDD
WWFGGGMDLT PNYGFAEDAR HFHVTLRDYC GRHSIADYRT MKETCDRYFF LKHRNEMRGI
GGIFFDDLHP DGPDGFDRAF AFVSDGITTI LDAYLPIVRR RMHTPYGERE RSWQLYRRGR
YVEFNLIYDR GTLFGLQTGG NIEAILMSLP PLARWQFKYQ PEPGSPEAAM AEFLKPRDWA
EE